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questions
3
votes
3
replies
3.1k
views
python function to kmer with windown size
python
kmer
biopython
fasta
updated 15 months ago by
mattmoore_91
• 0 • written 4.3 years ago by
flogin
▴ 280
5
votes
4
replies
1.2k
views
piRNA cluster annotation of non-model organisms
pirna
cluster
genomic
annotation
updated 3.5 years ago by
A. Domingues
★ 2.7k • written 3.5 years ago by
flogin
▴ 280
0
votes
1
reply
2.7k
views
Python and R libraries for phylogenetic plots
python
R
phylogeny
3.8 years ago by
flogin
▴ 280
8
votes
4
replies
1.3k
views
ncbi entrez protein by taxonomy ID
python
entrez
ncbi
protein
updated 3.8 years ago by
user_without_id
▴ 150 • written 3.8 years ago by
flogin
▴ 280
4
votes
1
reply
682
views
group viral family pandas dataframe by number of rows
pandas
python
dataframe
3.9 years ago by
flogin
▴ 280
6
votes
11
replies
1.5k
views
biopython entrez lost connection?
python
biopython
ncbi
taxonomy
3.9 years ago by
flogin
▴ 280
0
votes
1
reply
754
views
Limit of sequences for SMS - Smart model selection
alignment
sms
4.0 years ago by
flogin
▴ 280
0
votes
1
reply
1.2k
views
Uncommon wget behavior with ncbi genomes
ncbi
wget
genomes
updated 4.2 years ago by
vkkodali_ncbi
★ 3.7k • written 4.2 years ago by
flogin
▴ 280
6
votes
4
replies
1.7k
views
subprocess time running
python
subprocess
4.2 years ago by
flogin
▴ 280
3
votes
4
replies
1.3k
views
blast with python don't run
python
blast
updated 4.3 years ago by
gb
★ 2.2k • written 4.3 years ago by
flogin
▴ 280
2
votes
3
replies
1.4k
views
error to import NcbimakeblastdbCommandline
python
blast
biopython
4.3 years ago by
flogin
▴ 280
3
votes
2
replies
943
views
Assign redudancy in pandas dataframe
python
pandas
dataframe
updated 4.4 years ago by
Jianyu
▴ 580 • written 4.4 years ago by
flogin
▴ 280
3
votes
5
replies
1.2k
views
found non conserved regions between 2 genomes
genome
blast
alignment
updated 4.4 years ago by
harish
▴ 450 • written 4.4 years ago by
flogin
▴ 280
1
vote
5
replies
1.1k
views
accessing ncbi nucleotide section with python
python
ncbi
ids
match
4.4 years ago by
flogin
▴ 280
4
votes
2
replies
2.6k
views
Can -num_alignments influence the outfmt 6 blast output format?
blast
parameters
updated 4.5 years ago by
GenoMax
142k • written 4.5 years ago by
flogin
▴ 280
6
votes
8
replies
1.9k
views
RPKM with bowtie output
bowtie
rpkm
rna
count
updated 4.5 years ago by
anoo
▴ 10 • written 4.5 years ago by
flogin
▴ 280
0
votes
3
replies
764
views
Inserting bash and bioinformatic's scripts into browser database
browser
script
bash
java
python
4.7 years ago by
flogin
▴ 280
7
votes
5
replies
1.1k
views
Running blast command line inside python script
python
blast
pipeline
updated 4.7 years ago by
Mensur Dlakic
★ 27k • written 4.7 years ago by
flogin
▴ 280
2
votes
5
replies
1.2k
views
Working with redundant information on BLAST output
blast
filter
python
dictionary
4.8 years ago by
flogin
▴ 280
10
votes
11
replies
3.1k
views
Best practices for differential expression analysis
transcriptome
RNA-Seq
mapping
bowtie
best
updated 4.9 years ago by
Bastien Hervé
5.3k • written 4.9 years ago by
flogin
▴ 280
4
votes
9
replies
6.9k
views
Change mean color in seaborn
python
graph
color
seaborn
updated 4.9 years ago by
Philipp Bayer
8.4k • written 4.9 years ago by
flogin
▴ 280
4
votes
5
replies
1.2k
views
Tool for bottleneck analysis in genetics
genetics
bottleneck
updated 10 months ago by
Ram
43k • written 5.0 years ago by
flogin
▴ 280
3
votes
2
replies
673
views
awk to organize bed file
awk
bed
updated 5.0 years ago by
finswimmer
16k • written 5.0 years ago by
flogin
▴ 280
1
vote
3
replies
953
views
Extract and ADD text information
grep
text
5.0 years ago by
flogin
▴ 280
1
vote
4
replies
836
views
Tool to create alignments representations
alignment
updated 10 months ago by
Ram
43k • written 5.0 years ago by
flogin
▴ 280
0
votes
2
replies
1.8k
views
How blastn deal with intron and exons?
blast
blastn
genomics
5.1 years ago by
flogin
▴ 280
6
votes
5
replies
1.1k
views
Extract in specific column with patter file
grep
awk
updated 5.2 years ago by
Kevin Blighe
87k • written 5.2 years ago by
flogin
▴ 280
7
votes
3
replies
1.3k
views
Filtering BLAST results
alignment
blast
python
5.2 years ago by
flogin
▴ 280
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