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225
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Comment: Comment: How to convert Haps file to vcf file?
8 days ago by curious ▴ 750
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400
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Comment: Comment: Easy way to find out which allele is minor allele from bed file?
15 days ago by curious ▴ 750
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1
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400
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Comment: Comment: Easy way to find out which allele is minor allele from bed file?
15 days ago by curious ▴ 750
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240
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Comment: Comment: Can't figure out plink --sample-diff
5 weeks ago by curious ▴ 750
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398
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Comment: Comment: Why do these two variants appear to result in the same amino acid change when an
3 months ago by curious ▴ 750
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1
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1.2k
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Comment: Comment: Is there a way to get a list of all homogygous sites for each sample with plink
8 months ago by curious ▴ 750
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1
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641
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Comment: Comment: Is this a valid allele in a vcf?
9 months ago by curious ▴ 750
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1
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641
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Comment: Comment: Is this a valid allele in a vcf?
9 months ago by curious ▴ 750
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1
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680
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Comment: Comment: Is it possible to interpret HGVS without transcript version number?
9 months ago by curious ▴ 750
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1
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680
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Comment: Comment: Is it possible to interpret HGVS without transcript version number?
9 months ago by curious ▴ 750
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396
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Comment: Comment: jannovar download problem
9 months ago by curious ▴ 750
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532
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Comment: Comment: Why does this stop gained result in a longer protein than the canonical version
10 months ago by curious ▴ 750
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492
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Comment: Comment: How to check the imputation quality of genotyping files?
12 months ago by curious ▴ 750
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793
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Comment: Comment: Low SNP Overlap with Michigan 1KG and TopMed reference panel
12 months ago by curious ▴ 750
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706
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Comment: Comment: viewing hgvs in genome data viewer
12 months ago by curious ▴ 750
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1
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706
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Comment: Comment: viewing hgvs in genome data viewer
12 months ago by curious ▴ 750
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789
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Comment: Comment: drop duplicate insertion deletions in VCF at same position while keeping one
15 months ago by curious ▴ 750
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1
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2.3k
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Comment: Comment: fast way to get last position in a large indexed VCF?
20 months ago by curious ▴ 750
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1
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2.3k
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Comment: Comment: fast way to get last position in a large indexed VCF?
20 months ago by curious ▴ 750
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820
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Comment: Comment: is it possible to calculate MAF from DS instead of GT when using bcftools +fill-
20 months ago by curious ▴ 750
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820
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Comment: Comment: is it possible to calculate MAF from DS instead of GT when using bcftools +fill-
20 months ago by curious ▴ 750
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0
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1.2k
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Comment: Comment: grep a vcf
2.2 years ago by curious ▴ 750
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1.1k
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Comment: Comment: keep samples that carry non-reference allele in list of variants snpeff/snpsift
2.3 years ago by curious ▴ 750
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1
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1.1k
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Comment: Comment: keep samples that carry non-reference allele in list of variants snpeff/snpsift
2.3 years ago by curious ▴ 750
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0
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3.3k
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Comment: Comment: Applying Machine Learning on vcf file
2.5 years ago by curious ▴ 750
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1
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3.3k
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Comment: Comment: Applying Machine Learning on vcf file
2.6 years ago by curious ▴ 750
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2
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1.3k
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Comment: Comment: is local ancestry inference typically always run w/ array genotypes instead of
2.8 years ago by curious ▴ 750
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903
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Comment: Comment: RFMix v2 - ancestry per individual marker
2.8 years ago by curious ▴ 750
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2.3k
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Comment: Comment: How do I log into this ftp server and look around?
2.8 years ago by curious ▴ 750
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2
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2.3k
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Comment: Comment: How do I log into this ftp server and look around?
2.8 years ago by curious ▴ 750
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3.0k
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Comment: Comment: Highly used R packages with no Python equivalent
2.8 years ago by curious ▴ 750
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2
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5.9k
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Comment: Comment: sorting a multi-sample (genotype) vcf file
2.9 years ago by curious ▴ 750
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1.9k
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Comment: Comment: what pihat cutoffs from plink --genome are 3rd degree relative
3.0 years ago by curious ▴ 750
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1
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1.1k
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Comment: Comment: Make map file with recombination rate using plink?
3.0 years ago by curious ▴ 750
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804
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Comment: Comment: how to identify haplotypes and its frequency based SNP genotyping data?
3.0 years ago by curious ▴ 750
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584
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Comment: Comment: Does this output indicate my bam is paired end?
3.1 years ago by curious ▴ 750
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1
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1.0k
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Comment: Comment: Could someone help me check what genomic position is this variant nomenclature r
3.1 years ago by curious ▴ 750
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1.3k
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Comment: Comment: quick way to get samples that are NOT homozygous reference for a given record us
3.1 years ago by curious ▴ 750
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1
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1.3k
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Comment: Comment: quick way to get samples that are NOT homozygous reference for a given record us
3.1 years ago by curious ▴ 750
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0
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889
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Comment: C: STAR alignment loop segmentation fualt (core dumped)
3.2 years ago by curious ▴ 750
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0
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1.3k
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Comment: C: How do I organize snakemake when not all jobs successfully output files from pre
3.2 years ago by curious ▴ 750
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0
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922
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Comment: C: how to use unix tools to convert VCF genotypes like '1|1' to this '2'
3.2 years ago by curious ▴ 750
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0
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2.2k
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Comment: C: Merging WGS SNP array data
3.3 years ago by curious ▴ 750
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1
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2.2k
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Comment: C: Merging WGS SNP array data
3.3 years ago by curious ▴ 750
1
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1
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2.2k
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Comment: C: Merging WGS SNP array data
3.3 years ago by curious ▴ 750
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0
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785
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Comment: C: Is there a reason to limit dummy coding these alleles as 0 or 1 in this regressi
3.5 years ago by curious ▴ 750
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728
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Comment: C: What is the smallest number of cases you can have in a GWAS before interpretatio
3.5 years ago by curious ▴ 750
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1.6k
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Comment: C: logistic regression using HLA alllelic data
3.5 years ago by curious ▴ 750
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1.3k
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Comment: C: Is there anyway to get a unix parallel command to write to standard output
3.5 years ago by curious ▴ 750
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1
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1.1k
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Comment: C: How to do a multi-snp/haplotype based GWAS instead of a single snp GWAS in R?
3.5 years ago by curious ▴ 750
164 results • Page 1 of 4
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