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Comment: Comment: removing adaptor
2.7 years ago by prabin.dm ▴ 260
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2
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881
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removing adaptor
fastqc
updated 2.7 years ago by 142k • written 2.7 years ago by ▴ 260
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1.3k
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Answer: A: Center multiple pheatmap
3.4 years ago by prabin.dm ▴ 260
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950
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Comment: C: Why removing sample from one group in DESeqDataSet changes DGE of other two grou
3.4 years ago by prabin.dm ▴ 260
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2
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950
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Why removing sample from one group in DESeqDataSet changes DGE of other two groups ?
RNA-Seq DESeq2
updated 3.4 years ago by 8.7k • written 3.4 years ago by ▴ 260
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1.3k
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Comment: C: Correlation vs differential expression testing
4.2 years ago by prabin.dm ▴ 260
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0
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1.3k
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Comment: C: Correlation vs differential expression testing
4.2 years ago by prabin.dm ▴ 260
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4
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1.3k
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Correlation vs differential expression testing
qpcr
updated 4.2 years ago by ▴ 360 • written 4.2 years ago by ▴ 260
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0
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2.5k
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Comment: C: How to assign matching unique IDs to two datasets so that I can merge them corre
4.9 years ago by prabin.dm ▴ 260
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0
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729
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Answer: A: p53 mutations for NCI60 cell lines
4.9 years ago by prabin.dm ▴ 260
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0
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6.4k
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Comment: C: DESeq2 coutoff or LFC
4.9 years ago by prabin.dm ▴ 260
7
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1
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11k
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Answer: A: converting mouse emsembl gene IDs to Gene names by bioMart and gconvert with n
4.9 years ago by prabin.dm ▴ 260
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0
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11k
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Answer: A: converting mouse emsembl gene IDs to Gene names by bioMart and gconvert with n
4.9 years ago by prabin.dm ▴ 260
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1
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11k
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Comment: C: convering mouse emsembl gene IDs to Gene names by bioMart and gconvert with no
4.9 years ago by prabin.dm ▴ 260
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1
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6.4k
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Comment: C: DESeq2 coutoff or LFC
4.9 years ago by prabin.dm ▴ 260
2
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1
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844
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Answer: C: inherited cancer gene
4.9 years ago by prabin.dm ▴ 260
4
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1
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6.4k
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Answer: A: DESeq2 coutoff or LFC
4.9 years ago by prabin.dm ▴ 260
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1
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2.0k
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Comment: C: DESEQ2 Design formula testing cell type across condition
4.9 years ago by prabin.dm ▴ 260
2
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1
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4.8k
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Answer: A: adding batch variable in colData(dds)
4.9 years ago by prabin.dm ▴ 260
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0
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2.6k
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Answer: C: Fail to delete temporary folder
5.0 years ago by prabin.dm ▴ 260
3
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1
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2.6k
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Fail to delete temporary folder
star RSEM shell
5.0 years ago by prabin.dm ▴ 260
3
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1
reply
2.2k
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RSEM with STAR aligment
rsem star
updated 5.2 years ago by ▴ 10 • written 5.4 years ago by ▴ 260
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1
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4.9k
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Comment: C: Batch correction: Before and After Visualisation
5.2 years ago by prabin.dm ▴ 260
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3
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4.9k
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Batch correction: Before and After Visualisation
RNA-Seq Combat svaseq DESeq2
5.2 years ago by prabin.dm ▴ 260
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2
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3.7k
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Do STAR genome index and RSEM reference need to be from same files?
RNA-Seq RSEM STAR
updated 5.4 years ago by 47k • written 5.4 years ago by ▴ 260
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1
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2.4k
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Comment: C: STAR alignment error: quantmod not found
5.4 years ago by prabin.dm ▴ 260
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4
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2.4k
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STAR alignment error: quantmod not found
STAR RNAseq alignment
updated 5.4 years ago by 104k • written 5.4 years ago by ▴ 260
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2
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1.4k
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DGE Analysis between 3 conditions
RNA-Seq DESeq edgeR
5.4 years ago by prabin.dm ▴ 260
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0
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9.6k
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Comment: C: STAR alignment error: ERROR in input reads
5.4 years ago by prabin.dm ▴ 260
15
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12
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9.6k
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STAR alignment error: ERROR in input reads
fastq STAR RNA-Seq
5.4 years ago by prabin.dm ▴ 260
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0
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9.6k
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Comment: C: FASTQ file format
5.4 years ago by prabin.dm ▴ 260
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1
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9.6k
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Comment: C: FASTQ file format
5.4 years ago by prabin.dm ▴ 260
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2
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9.6k
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Comment: C: FASTQ file format
5.4 years ago by prabin.dm ▴ 260
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0
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9.6k
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Comment: C: FASTQ file format
5.4 years ago by prabin.dm ▴ 260
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1
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1.3k
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Comment: C: SimpleRleList to GRanges
5.6 years ago by prabin.dm ▴ 260
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2
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1.3k
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SimpleRleList to GRanges
ChIP-Seq rtracklayer
5.6 years ago by prabin.dm ▴ 260
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1
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3.9k
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Comment: C: RSEM calculate expression troubleshoot
5.8 years ago by prabin.dm ▴ 260
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0
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3.9k
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Comment: C: RSEM calculate expression troubleshoot
5.8 years ago by prabin.dm ▴ 260
0
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0
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3.9k
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Comment: C: RSEM calculate expression troubleshoot
5.8 years ago by prabin.dm ▴ 260
4
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8
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3.9k
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RSEM calculate expression troubleshoot
RNA-Seq RSEM
5.8 years ago by prabin.dm ▴ 260
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1
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2.4k
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Comment: C: STAR index preparation fails
5.8 years ago by prabin.dm ▴ 260
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0
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2.4k
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Comment: C: STAR index preparation fails
5.8 years ago by prabin.dm ▴ 260
2
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4
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2.4k
views
STAR index preparation fails
RNA-Seq STAR
updated 5.8 years ago by 35k • written 5.8 years ago by ▴ 260
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