Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
24k
views
Comment: C: What is the right illumina universal adapter sequence for trimming paired-end re
3.6 years ago by MatthewP ★ 1.4k
2
votes
2
replies
5.2k
views
Answer: A: HISAT2- (ERR): hisat2-align exited with value 134
3.7 years ago by MatthewP ★ 1.4k
0
votes
0
replies
7.2k
views
Comment: C: ATAC-seq +4 -5 shift
3.7 years ago by MatthewP ★ 1.4k
1
vote
0
replies
1.5k
views
Answer: A: Web scraping in the KEGG db
3.7 years ago by MatthewP ★ 1.4k
0
votes
1
reply
1.0k
views
Comment: C: How to parse text correctly for bowtie2 --rg parameter?
3.7 years ago by MatthewP ★ 1.4k
0
votes
1
reply
1.0k
views
Comment: C: How to parse text correctly for bowtie2 --rg parameter?
3.7 years ago by MatthewP ★ 1.4k
0
votes
5
replies
1.0k
views
How to parse text correctly for bowtie2 --rg parameter?
bowtie2
3.7 years ago by MatthewP ★ 1.4k
0
votes
1
reply
1.7k
views
Comment: C: error in MarkDuplicates Picard
3.8 years ago by MatthewP ★ 1.4k
1
vote
1
reply
1.3k
views
Comment: C: Uneven number of technical replicates for biological replicates in RNA-seq
3.8 years ago by MatthewP ★ 1.4k
0
votes
0
replies
579
views
Answer: A: From Fastq to vcf
3.8 years ago by MatthewP ★ 1.4k
0
votes
0
replies
1.6k
views
Answer: A: how Creat un-aligne file with bowtie?
3.8 years ago by MatthewP ★ 1.4k
0
votes
1
reply
798
views
Comment: C: Help improve search paper skill.
3.8 years ago by MatthewP ★ 1.4k
1
vote
4
replies
798
views
Help improve search paper skill.
pubmed
updated 3.8 years ago by ▴ 180 • written 3.8 years ago by ★ 1.4k
0
votes
0
replies
847
views
Comment: C: Remove reads where quality score length does not equal sequence length
3.9 years ago by MatthewP ★ 1.4k
1
vote
1
reply
882
views
Answer: A: Does anyone have experience of methylation alignment tool "Bismark"?
3.9 years ago by MatthewP ★ 1.4k
1
vote
1
reply
974
views
Answer: A: How to download matrix of the "GSE73554"
3.9 years ago by MatthewP ★ 1.4k
1
vote
1
reply
1.1k
views
Bismark alignment report total C base number problem.
WGBS Bismark
3.9 years ago by MatthewP ★ 1.4k
1
vote
0
replies
1.1k
views
Answer: A: Bismark alignment report total C base number problem.
3.9 years ago by MatthewP ★ 1.4k
4
votes
0
replies
1.2k
views
Answer: A: Barplot labeling squeezed the bars
3.9 years ago by MatthewP ★ 1.4k
0
votes
0
replies
630
views
Tools to extract circRNA data from rRNA-depleted RNA-seq?
circRNA RNA-Seq
4.0 years ago by MatthewP ★ 1.4k
3
votes
1
reply
913
views
Answer: A: Boxplot or ggplot
4.0 years ago by MatthewP ★ 1.4k
2
votes
1
reply
4.0k
views
Answer: A: How can I use Seurat with *_filtered_gene_bc_matrices_h5.h5 files
4.0 years ago by MatthewP ★ 1.4k
0
votes
1
reply
844
views
Answer: A: How to get a snapshot for the content of some file on Pfam ?
4.0 years ago by MatthewP ★ 1.4k
1
vote
1
reply
2.3k
views
Comment: C: Massive L2FC in DESeq2
4.1 years ago by MatthewP ★ 1.4k
1
vote
0
replies
12k
views
Comment: C: Automatic Outlier Detection for RNA-seq data
4.1 years ago by MatthewP ★ 1.4k
1
vote
1
reply
8.6k
views
Answer: A: gseGO: no term enriched under specific pvalueCutoff
4.1 years ago by MatthewP ★ 1.4k
0
votes
0
replies
690
views
DESeq2 rlog output some genes all zero value.
RNA-Seq DESeq2
4.1 years ago by MatthewP ★ 1.4k
1
vote
2
replies
5.6k
views
Comment: C: How to do Disease-Free survival analysis with TCGA data ??
4.1 years ago by MatthewP ★ 1.4k
0
votes
1
reply
5.6k
views
Answer: A: How to do Disease-Free survival analysis with TCGA data ??
4.1 years ago by MatthewP ★ 1.4k
2
votes
0
replies
5.7k
views
Answer: A: Best practice for analysing ATAC-seq data
4.1 years ago by MatthewP ★ 1.4k
0
votes
0
replies
3.4k
views
Answer: A: vcf2maf VEP annotated VCF conversion
4.1 years ago by MatthewP ★ 1.4k
2
votes
1
reply
1.3k
views
Comment: C: GSEA analysis RNA-seq data
4.1 years ago by MatthewP ★ 1.4k
2
votes
1
reply
1.3k
views
Answer: C: GSEA analysis RNA-seq data
4.1 years ago by MatthewP ★ 1.4k
0
votes
1
reply
3.3k
views
Conda environment Rtools problem
R
updated 4.1 years ago by ▴ 800 • written 4.1 years ago by ★ 1.4k
2
votes
1
reply
16k
views
Comment: C: Clusterprofiler error: No gene can be mapped
4.1 years ago by MatthewP ★ 1.4k
0
votes
0
replies
683
views
Answer: A: How to remove reads supporting the same fragment that other reads support
4.1 years ago by MatthewP ★ 1.4k
3
votes
1
reply
16k
views
Answer: C: Clusterprofiler error: No gene can be mapped
4.1 years ago by MatthewP ★ 1.4k
2
votes
0
replies
20k
views
Answer: A: Conversion of Gene Name to Ensemble ID
4.1 years ago by MatthewP ★ 1.4k
0
votes
0
replies
990
views
Comment: C: DEGS analysis with DESeq2?
4.1 years ago by MatthewP ★ 1.4k
0
votes
1
reply
1.4k
views
Comment: C: How to get negative 2 ks test D value in R?
4.2 years ago by MatthewP ★ 1.4k
0
votes
3
replies
1.4k
views
How to get negative 2 ks test D value in R?
RNA-Seq statics
4.2 years ago by MatthewP ★ 1.4k
0
votes
0
replies
2.7k
views
Comment: C: TCGA TMB: What exome size to use?
4.2 years ago by MatthewP ★ 1.4k
0
votes
0
replies
4.7k
views
Comment: C: WGCNA exportNetworkToCytoscape issue!!
4.2 years ago by MatthewP ★ 1.4k
0
votes
0
replies
1.9k
views
Comment: C: How maftools oncoplot classify variant type?
4.3 years ago by MatthewP ★ 1.4k
0
votes
1
reply
1.9k
views
How maftools oncoplot classify variant type?
maftools
4.3 years ago by MatthewP ★ 1.4k
0
votes
0
replies
2.3k
views
Seeks good way to convert GB_LIST to SYMBOL
geo
4.3 years ago by MatthewP ★ 1.4k
1
vote
0
replies
13k
views
Answer: A: Building Dict File for GATK
4.3 years ago by MatthewP ★ 1.4k
0
votes
0
replies
11k
views
Comment: C: problems with MAF for MutSigCV (vcf2maf)
4.4 years ago by MatthewP ★ 1.4k
1
vote
0
replies
11k
views
Answer: A: Clusterprofiler gseGO and GSEA
4.4 years ago by MatthewP ★ 1.4k
0
votes
0
replies
2.0k
views
Answer: A: deleting TCGA replicated samples
4.4 years ago by MatthewP ★ 1.4k
274 results • Page 3 of 6
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6