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Answer: Answer: bcl2fastq not recognizing multiple barcode-mismatch argument
10 months ago by swbarnes2 14k
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Comment: Comment: Is RSEM required for RNA-seq data analysis using STAR and edgeR?
10 months ago by swbarnes2 14k
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1.2k
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Answer: Answer: Is RSEM required for RNA-seq data analysis using STAR and edgeR?
10 months ago by swbarnes2 14k
1
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0
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690
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Answer: Answer: 10x genomics hashtag samples
10 months ago by swbarnes2 14k
1
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1
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636
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Answer: Answer: DESeq2, Time-course interpretation
10 months ago by swbarnes2 14k
4
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2.0k
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Answer: Answer: Multiple testing correction in RNA-Seq
10 months ago by swbarnes2 14k
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1.2k
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Comment: Comment: Transcript quantification
11 months ago by swbarnes2 14k
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0
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2.3k
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Answer: Answer: How to create a Seurat object from the `xxx_metadata.txt.gz ` and `xxx_counts.t
11 months ago by swbarnes2 14k
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0
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1.9k
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Comment: Comment: Getting sequences from fastq file using Grep command
11 months ago by swbarnes2 14k
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1
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1.9k
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Answer: Answer: Getting sequences from fastq file using Grep command
11 months ago by swbarnes2 14k
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0
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1.3k
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Comment: Comment: A question about the raw RNA-seq processing workflow
11 months ago by swbarnes2 14k
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1
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1.3k
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Comment: Comment: A question about the raw RNA-seq processing workflow
11 months ago by swbarnes2 14k
4
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2
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1.3k
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Answer: Answer: Italicise annotations with pheatmap
11 months ago by swbarnes2 14k
0
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0
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1.9k
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Comment: Comment: Counting intronic reads in bulk RNA-seq
11 months ago by swbarnes2 14k
0
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1
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788
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Comment: Comment: Ambient RNA expression correction
11 months ago by swbarnes2 14k
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1.0k
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Answer: Answer: What is the best way to clean bulk RNA-seq data?
11 months ago by swbarnes2 14k
0
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0
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1.1k
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Comment: Comment: RNAseq Data and Pipeline
11 months ago by swbarnes2 14k
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0
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1.1k
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Comment: Comment: Is there anyway to cancel CPM normalization?
11 months ago by swbarnes2 14k
0
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0
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1.5k
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Comment: Comment: Single cell chemistry
11 months ago by swbarnes2 14k
0
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0
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1.5k
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Comment: Comment: Single cell chemistry
11 months ago by swbarnes2 14k
0
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1
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1.5k
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Comment: Comment: Single cell chemistry
11 months ago by swbarnes2 14k
0
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1
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1.5k
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Comment: Comment: Single cell chemistry
11 months ago by swbarnes2 14k
1
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2
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1.9k
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Answer: Answer: Counting intronic reads in bulk RNA-seq
11 months ago by swbarnes2 14k
0
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1
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1.5k
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Answer: Answer: Single cell chemistry
11 months ago by swbarnes2 14k
0
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0
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657
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Answer: Answer: How to extract out gene specific reads from concatenated fastq file
11 months ago by swbarnes2 14k
1
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0
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668
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Comment: Comment: Using RNA-seq to detect pathogen sequences in host tissue
11 months ago by swbarnes2 14k
0
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0
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896
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Answer: Answer: rna seq design matrix
12 months ago by swbarnes2 14k
1
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0
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489
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Answer: Answer: Different read numbers for the same samples
12 months ago by swbarnes2 14k
1
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0
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1.4k
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Comment: Comment: On "wings" in volcano plots...
12 months ago by swbarnes2 14k
1
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1
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2.6k
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Comment: Comment: Subsetting DESeq data set to compare treatments within one group (multi-group ex
12 months ago by swbarnes2 14k
1
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1
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2.6k
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Answer: Answer: Subsetting DESeq data set to compare treatments within one group (multi-group ex
12 months ago by swbarnes2 14k
0
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0
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858
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Comment: Comment: How to better distribute my replicates between two batches of bulk RNAseq?
12 months ago by swbarnes2 14k
2
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1
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858
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Answer: Answer: How to better distribute my replicates between two batches of bulk RNAseq?
12 months ago by swbarnes2 14k
1
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0
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857
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Answer: Answer: Problematic experimental design RNA-Seq
12 months ago by swbarnes2 14k
1
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1
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1.1k
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Comment: Comment: t-test to check if the cancer samples are significantly different than the norma
12 months ago by swbarnes2 14k
0
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1
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2.2k
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Comment: Comment: Obtaining TPM values from STAR alignment and counts with featurecounts using R's
12 months ago by swbarnes2 14k
2
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3
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2.2k
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Answer: Answer: Obtaining TPM values from STAR alignment and counts with featurecounts using R's
12 months ago by swbarnes2 14k
0
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1
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801
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Comment: Comment: Genecount-difference between HT-seq count, RSEM, and Kallisto
12 months ago by swbarnes2 14k
0
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0
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645
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Comment: Comment: mRNA counts
12 months ago by swbarnes2 14k
0
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0
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679
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Answer: Answer: Issue running RSEM
12 months ago by swbarnes2 14k
2
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1
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696
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Answer: Answer: Fastqs different lanes
12 months ago by swbarnes2 14k
0
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0
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1.0k
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Answer: Answer: batch effect in RNA-Seq
13 months ago by swbarnes2 14k
0
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0
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1.6k
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Comment: Comment: How can I make all my PCA plots the same shape using ggplots?
13 months ago by swbarnes2 14k
0
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1
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1.1k
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Comment: Comment: Is there anyway to cancel CPM normalization?
13 months ago by swbarnes2 14k
0
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1
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1.1k
views
Answer: Answer: Is there anyway to cancel CPM normalization?
13 months ago by swbarnes2 14k
0
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0
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1.4k
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Comment: Comment: DESeq2 multiple conditions, time points and sample types
13 months ago by swbarnes2 14k
0
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1
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6.0k
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Answer: Answer: How Can I Compare Differential Expression Data From Mouse And Human?
13 months ago by swbarnes2 14k
0
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0
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803
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Answer: Answer: Detecting heterozygous deletions in NGS sequence data
13 months ago by swbarnes2 14k
2
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0
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854
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Comment: Comment: trimmomatic and STAR alignments
13 months ago by swbarnes2 14k
0
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1
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902
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Comment: Comment: How to tell which exon does a variant located?
13 months ago by swbarnes2 14k
2,010 results • Page 3 of 41
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