Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : answers
2
votes
1
reply
565
views
Answer: Answer: Pre-imputation checks using 1000G data (hg19) for a hg38 VCF
7 months ago by bk11 ★ 2.5k
1
vote
1
reply
1.5k
views
Answer: Answer: Seurat changing order cluster shown in the violin plot
7 months ago by bk11 ★ 2.5k
0
votes
0
replies
489
views
Answer: Answer: Changing LFC font size on Complex Heatmap
7 months ago by bk11 ★ 2.5k
1
vote
0
replies
689
views
Answer: Answer: pheatmap
7 months ago by bk11 ★ 2.5k
3
votes
1
reply
512
views
Answer: Answer: Feature plot not applicable for RunTSNE object in seurat?
7 months ago by bk11 ★ 2.5k
3
votes
1
reply
829
views
Answer: Answer: Exporting DEGs obtained from DESeq2
7 months ago by bk11 ★ 2.5k
0
votes
0
replies
607
views
Answer: Answer: GOSt Plot
7 months ago by bk11 ★ 2.5k
2
votes
1
reply
1.3k
views
Answer: Answer: Help with error running velocyto
7 months ago by bk11 ★ 2.5k
0
votes
1
reply
1.1k
views
Answer: Answer: Search RCSB with a list of protein names?
7 months ago by bk11 ★ 2.5k
2
votes
0
replies
553
views
Answer: Answer: Imputation server failing to see samples in VCF files
7 months ago by bk11 ★ 2.5k
3
votes
1
reply
1.4k
views
Answer: Answer: How to convert data in r?
updated 7 months ago by 43k • written 7 months ago by ★ 2.5k
1
vote
1
reply
1.9k
views
Answer: Answer: Converting hdf5 file to loom file
7 months ago by bk11 ★ 2.5k
0
votes
1
reply
2.0k
views
Answer: Answer: How to plot proportion of cells in each cluster with scanpy?
7 months ago by bk11 ★ 2.5k
0
votes
1
reply
962
views
Answer: Answer: Violin plot (Monocle 3) - Troubleshooting
updated 7 months ago by 43k • written 7 months ago by ★ 2.5k
1
vote
1
reply
532
views
Answer: Answer: miRDeep2 - identifying miRNAs from deep sequencing data
7 months ago by bk11 ★ 2.5k
1
vote
1
reply
958
views
Answer: Answer: How to display all top markers in the heatmap by DoHeatmap (Seurat) when there a
updated 8 months ago by 43k • written 8 months ago by ★ 2.5k
0
votes
1
reply
1.5k
views
Answer: Answer: Inflated GWAS test statistic after merging multiple batches of genotype dataset
8 months ago by bk11 ★ 2.5k
0
votes
0
replies
1.1k
views
Answer: Answer: differential gene expression analysis comparing different conditions using scRNA
8 months ago by bk11 ★ 2.5k
3
votes
0
replies
417
views
Answer: Answer: Automatic Cluster Annotation to the subsets of immune cells
8 months ago by bk11 ★ 2.5k
0
votes
1
reply
741
views
Answer: Answer: Data Import Issue detectRUNS R
8 months ago by bk11 ★ 2.5k
0
votes
1
reply
808
views
Answer: Answer: GTF annotation file for Hg38 Dec 2013 (First Release)
8 months ago by bk11 ★ 2.5k
2
votes
1
reply
466
views
Answer: Answer: How to split grouping information in a single expression matrix?
8 months ago by bk11 ★ 2.5k
0
votes
1
reply
841
views
Answer: Answer: Running Enrichr in python using a background gene list
8 months ago by bk11 ★ 2.5k
2
votes
0
replies
3.4k
views
Answer: Answer: Running python script in slurm using conda environment
8 months ago by bk11 ★ 2.5k
2
votes
0
replies
535
views
Answer: Answer: how to remove description from header?
8 months ago by bk11 ★ 2.5k
1
vote
0
replies
891
views
Answer: Answer: summarize consecutive columns over a data frame
updated 7 months ago by 43k • written 8 months ago by ★ 2.5k
0
votes
0
replies
501
views
Answer: Answer: Choosing background for ORA using scrnaseq
8 months ago by bk11 ★ 2.5k
0
votes
1
reply
643
views
Answer: Answer: Michigan Imputation Server low reference overlap
8 months ago by bk11 ★ 2.5k
0
votes
1
reply
1.2k
views
Answer: Answer: Is there a way to get a list of all homogygous sites for each sample with plink
8 months ago by bk11 ★ 2.5k
2
votes
0
replies
633
views
Answer: Answer: Consensus Cluster takes normalized gene counts or raw gene counts?
8 months ago by bk11 ★ 2.5k
3
votes
0
replies
1.0k
views
Answer: Answer: Could not view/find meta.data and Error merging three seurat object
8 months ago by bk11 ★ 2.5k
0
votes
0
replies
1.9k
views
Answer: Answer: How to limit fasta header to 40 characters?
8 months ago by bk11 ★ 2.5k
0
votes
0
replies
687
views
Answer: Answer: GO annotation in R using library(org.Hs.eg.db)
8 months ago by bk11 ★ 2.5k
2
votes
1
reply
1.9k
views
Answer: Answer: How to limit fasta header to 40 characters?
8 months ago by bk11 ★ 2.5k
2
votes
0
replies
631
views
Answer: Answer: About scdbfinder
8 months ago by bk11 ★ 2.5k
4
votes
1
reply
679
views
Answer: Answer: How to calculate GC content of reads that mapped to a specific gene?
8 months ago by bk11 ★ 2.5k
1
vote
1
reply
1.2k
views
Answer: Answer: R based query about making pairwise matrix
8 months ago by bk11 ★ 2.5k
2
votes
2
replies
1.6k
views
Answer: Answer: Help with Error: Required version of NumPy not available: installation of Numpy
8 months ago by bk11 ★ 2.5k
0
votes
1
reply
1.4k
views
Answer: Answer: CellRanger output more cells than specified using --force-cells? Why?
8 months ago by bk11 ★ 2.5k
0
votes
1
reply
1.6k
views
Answer: Answer: Negative Expression in RNA Assay on Dot Plot After SCT Transform
8 months ago by bk11 ★ 2.5k
0
votes
0
replies
435
views
Answer: Answer: Checking a SNP as common SNP or not using UCSC genome browser
8 months ago by bk11 ★ 2.5k
1
vote
0
replies
336
views
Answer: Answer: tfea.chip mouse server
8 months ago by bk11 ★ 2.5k
2
votes
1
reply
890
views
Answer: Answer: Integration in single cell RNAseq: What does it mean?
8 months ago by bk11 ★ 2.5k
0
votes
1
reply
937
views
Answer: Answer: Can the DESeq2 object for paired data be set with design= ~ batch + condition?
8 months ago by bk11 ★ 2.5k
2
votes
1
reply
680
views
Answer: Answer: Help with error using ClosetFeature() in Signac
8 months ago by bk11 ★ 2.5k
1
vote
1
reply
557
views
Answer: Answer: Non-coding DNA structure prediction recomendation
8 months ago by bk11 ★ 2.5k
1
vote
1
reply
1.0k
views
Answer: Answer: How to construct an adjacency matrix based on output of nearest neighbors sear
8 months ago by bk11 ★ 2.5k
0
votes
0
replies
768
views
Answer: Answer: How to Add Mutations to the sequence
8 months ago by bk11 ★ 2.5k
0
votes
0
replies
1.2k
views
Answer: Answer: Identifying transcription factors for a list of genes
updated 7 months ago by 43k • written 8 months ago by ★ 2.5k
1
vote
1
reply
583
views
Answer: Answer: Trouble with breseq Bam2Cov
8 months ago by bk11 ★ 2.5k
149 results • Page 2 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6