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Comment:
Comment: How to find what is the most significantly modulated gene in GEO2R analysis?
3 months ago by
bk11
★ 2.5k
0
votes
1
reply
377
views
Answer:
Answer: Converting SNP data table into .traw format or qtl (R) format
3 months ago by
bk11
★ 2.5k
1
vote
1
reply
882
views
Comment:
Comment: ensembl - selecting SNPs of specific genes
3 months ago by
bk11
★ 2.5k
0
votes
1
reply
882
views
Comment:
Comment: ensembl - selecting SNPs of specific genes
3 months ago by
bk11
★ 2.5k
1
vote
1
reply
882
views
Comment:
Comment: ensembl - selecting SNPs of specific genes
3 months ago by
bk11
★ 2.5k
3
votes
1
reply
882
views
Answer:
Answer: ensembl - selecting SNPs of specific genes
3 months ago by
bk11
★ 2.5k
1
vote
0
replies
269
views
Answer:
Answer: 1000 genome project specific genes selection
3 months ago by
bk11
★ 2.5k
0
votes
0
replies
559
views
Answer:
Answer: reading scRNAseq .h5 file into anndata format from GEO - No clear matrix?
3 months ago by
bk11
★ 2.5k
0
votes
0
replies
301
views
Comment:
Comment: X chromosome inactivation
3 months ago by
bk11
★ 2.5k
0
votes
0
replies
300
views
Answer:
Answer: GWAS on unbalanced case-control UKB dataset using PLINK2
3 months ago by
bk11
★ 2.5k
0
votes
0
replies
480
views
Comment:
Comment: Need suggestions for ROC Curve in R
3 months ago by
bk11
★ 2.5k
0
votes
0
replies
269
views
Comment:
Comment: CellPlex CMO highbackground
3 months ago by
bk11
★ 2.5k
0
votes
1
reply
519
views
Comment:
Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
3 months ago by
bk11
★ 2.5k
0
votes
1
reply
519
views
Comment:
Comment: Extract bfile from .bgen using a given .bim to handle duplicated snps
3 months ago by
bk11
★ 2.5k
0
votes
1
reply
398
views
Comment:
Comment: How to choose --hwe threshold?
3 months ago by
bk11
★ 2.5k
1
vote
0
replies
485
views
Comment:
Comment: Merge seurat list
3 months ago by
bk11
★ 2.5k
0
votes
0
replies
416
views
Comment:
Comment: GO enrichment plot with dotplot strange axis
3 months ago by
bk11
★ 2.5k
1
vote
1
reply
485
views
Answer:
Answer: Merge seurat list
3 months ago by
bk11
★ 2.5k
0
votes
1
reply
416
views
Comment:
Comment: GO enrichment plot with dotplot strange axis
3 months ago by
bk11
★ 2.5k
2
votes
1
reply
551
views
Answer:
Answer: Splitting scRNA seq data from Multiome data(scRNA+ scATAC)
updated 3 months ago by
Ram
44k • written 3 months ago by
bk11
★ 2.5k
1
vote
1
reply
1.7k
views
Answer:
Answer: Issues with Merging Seurat Objects: Multiple Counts in Assays Layer
3 months ago by
bk11
★ 2.5k
0
votes
1
reply
521
views
Comment:
Comment: How to find SNP locations in assemblies other than hg38
3 months ago by
bk11
★ 2.5k
1
vote
0
replies
337
views
Answer:
Answer: Extract information of mapped reads bam files
3 months ago by
bk11
★ 2.5k
2
votes
1
reply
1.1k
views
Comment:
Comment: Shrink logFC values after edgeR
3 months ago by
bk11
★ 2.5k
0
votes
0
replies
272
views
Comment:
Comment: Is it possible to identify the strand of an RNA using UMI?
3 months ago by
bk11
★ 2.5k
0
votes
1
reply
592
views
Comment:
Comment: Does salmon work with combined short and long read bam file?
3 months ago by
bk11
★ 2.5k
0
votes
1
reply
552
views
Comment:
Comment: allele matching between identical genotypes
3 months ago by
bk11
★ 2.5k
0
votes
0
replies
247
views
Comment:
Comment: EnhancedVolcanop plot using GSE data
3 months ago by
bk11
★ 2.5k
1
vote
1
reply
514
views
Comment:
Comment: 1000G Reference Panel Hg38 Michigan Imputation Server
3 months ago by
bk11
★ 2.5k
2
votes
1
reply
647
views
Comment:
Comment: PCA plot interpretation (single population)
3 months ago by
bk11
★ 2.5k
0
votes
0
replies
309
views
Answer:
Answer: Obtain rsID GWAS variants (9M)
3 months ago by
bk11
★ 2.5k
2
votes
0
replies
325
views
Answer:
Answer: Data scaling in single-cell RNAseq - sample-wise or on the full set?
3 months ago by
bk11
★ 2.5k
0
votes
1
reply
419
views
Comment:
Comment: GEO Affymetrix data for differential expression analysis?
4 months ago by
bk11
★ 2.5k
1
vote
0
replies
485
views
Comment:
Comment: Transcript Based Annotation of Variants Using Annovar
4 months ago by
bk11
★ 2.5k
0
votes
1
reply
456
views
Comment:
Comment: Freyja tool help
4 months ago by
bk11
★ 2.5k
1
vote
0
replies
328
views
Answer:
Answer: filter 1000 genome vcf file to keep common snps
4 months ago by
bk11
★ 2.5k
0
votes
0
replies
718
views
Answer:
Answer: Liftover - Picard and plink issues when performing liftover from CanFam4 to CanF
4 months ago by
bk11
★ 2.5k
1
vote
0
replies
280
views
Comment:
Comment: Extract Domain Architectures from Pfam / Interpro
4 months ago by
bk11
★ 2.5k
0
votes
0
replies
317
views
Comment:
Comment: Compute ld and genomic distance using clump function in plink
4 months ago by
bk11
★ 2.5k
1
vote
1
reply
1.2k
views
Comment:
Comment: How to remove the analysis slots added to my scRNA-Seq and scATAC-Seq data objec
5 months ago by
bk11
★ 2.5k
1
vote
1
reply
1.2k
views
Answer:
Answer: How to remove the analysis slots added to my scRNA-Seq and scATAC-Seq data objec
5 months ago by
bk11
★ 2.5k
0
votes
0
replies
509
views
Comment:
Comment: sample data for plant RNA seq analysis
5 months ago by
bk11
★ 2.5k
1
vote
0
replies
392
views
Comment:
Comment: RNA-Seq and ATAC-Seq quality check
5 months ago by
bk11
★ 2.5k
0
votes
0
replies
770
views
Comment:
Comment: There are several lines in Manhattan plot.
5 months ago by
bk11
★ 2.5k
2
votes
0
replies
361
views
Answer:
Answer: OSCA -open .h5 file
5 months ago by
bk11
★ 2.5k
0
votes
0
replies
319
views
Comment:
Comment: Trimming reads before running Juicer
5 months ago by
bk11
★ 2.5k
1
vote
0
replies
348
views
Comment:
Comment: Metabolomics Data Analysis
5 months ago by
bk11
★ 2.5k
0
votes
1
reply
770
views
Answer:
Answer: There are several lines in Manhattan plot.
5 months ago by
bk11
★ 2.5k
0
votes
1
reply
463
views
Answer:
Answer: tool to find enhancer associated to gene list
5 months ago by
bk11
★ 2.5k
1
vote
1
reply
635
views
Answer:
Answer: How to compute Hudson's/Bhatia's FST in R OR with vcf?
5 months ago by
bk11
★ 2.5k
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