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Comment: Comment: Correlate number of cells with gene expression of one gene in scRNA Seq
3 months ago by antonioggsousa 3.2k
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777
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Comment: Comment: how to use multiple command in one line with using the output of last command to
4 months ago by antonioggsousa 3.2k
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0
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479
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Answer: Answer: Single cell visulaisation webtool
4 months ago by antonioggsousa 3.2k
3
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1
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757
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Answer: Answer: Can't do runPCA after merging a splited Seurat object before UMAP
4 months ago by antonioggsousa 3.2k
3
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1
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809
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Answer: Answer: Should I scale all genes in single cell Seurat?
4 months ago by antonioggsousa 3.2k
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0
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941
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Comment: Comment: DESeq2 lfcshrink, shrinkage apeglm vs normal
6 months ago by antonioggsousa 3.2k
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0
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534
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Answer: Answer: Monocle3 transition to seurat
6 months ago by antonioggsousa 3.2k
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1
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941
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Comment: Comment: DESeq2 lfcshrink, shrinkage apeglm vs normal
6 months ago by antonioggsousa 3.2k
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0
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402
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Answer: Answer: Using DADA2 for finding viral sequence variants
6 months ago by antonioggsousa 3.2k
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1
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1.1k
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Comment: Comment: Cacoa with Seurat analysis
6 months ago by antonioggsousa 3.2k
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1
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761
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Comment: Comment: Phyloseq and ASV names between datasets
6 months ago by antonioggsousa 3.2k
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1.1k
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Answer: Answer: Cacoa with Seurat analysis
6 months ago by antonioggsousa 3.2k
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1
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1.1k
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Comment: Comment: Cacoa with Seurat analysis
6 months ago by antonioggsousa 3.2k
2
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1
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1.5k
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Comment: Comment: When should I NOT apply batch correction for my single-cell RNAseq data?
6 months ago by antonioggsousa 3.2k
8
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3
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1.5k
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Answer: Answer: When should I NOT apply batch correction for my single-cell RNAseq data?
updated 6 months ago by 43k • written 6 months ago by 3.2k
0
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1
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969
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Comment: Comment: 18S taxonomy assignment SILVA database formatting
6 months ago by antonioggsousa 3.2k
1
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1
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969
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Answer: Answer: 18S taxonomy assignment SILVA database formatting
6 months ago by antonioggsousa 3.2k
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1
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969
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Comment: Comment: 18S taxonomy assignment SILVA database formatting
6 months ago by antonioggsousa 3.2k
0
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1
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969
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Comment: Comment: 18S taxonomy assignment SILVA database formatting
6 months ago by antonioggsousa 3.2k
1
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1
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566
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Comment: Comment: functional analysis applied on 16S rRNA Gene Metabarcoding data
7 months ago by antonioggsousa 3.2k
4
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0
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1.6k
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Comment: Comment: Batch effect correction methods (Seurat v3, Harmony, fastMNN, Liger)
14 months ago by antonioggsousa 3.2k
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0
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1.5k
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Comment: Comment: RDS file in Rstudio
14 months ago by antonioggsousa 3.2k
3
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1
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1.5k
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Comment: Comment: RDS file in Rstudio
14 months ago by antonioggsousa 3.2k
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1
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1.5k
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Comment: Comment: RDS file in Rstudio
14 months ago by antonioggsousa 3.2k
2
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1
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3.1k
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Answer: Answer: DoHeatmap Seurat Edit Legend
15 months ago by antonioggsousa 3.2k
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0
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2.2k
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Comment: Comment: How to get parameter for cluster in scCATCH tool
19 months ago by antonioggsousa 3.2k
1
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1
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2.2k
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Comment: Comment: How to get parameter for cluster in scCATCH tool
19 months ago by antonioggsousa 3.2k
1
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1
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2.2k
views
Comment: Comment: How to get parameter for cluster in scCATCH tool
19 months ago by antonioggsousa 3.2k
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0
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3.0k
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Comment: Comment: Multiple conditions DESeq2
19 months ago by antonioggsousa 3.2k
1
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1
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2.2k
views
Comment: Comment: How to get parameter for cluster in scCATCH tool
19 months ago by antonioggsousa 3.2k
2
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1
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2.2k
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Answer: Answer: How to get parameter for cluster in scCATCH tool
19 months ago by antonioggsousa 3.2k
0
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0
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724
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Comment: Comment: CD4+ and CD8+ T cell classification
20 months ago by antonioggsousa 3.2k
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1
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724
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Comment: Comment: CD4+ and CD8+ T cell classification
20 months ago by antonioggsousa 3.2k
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1
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1.6k
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Answer: Answer: Are there any tools that automatically detect where to truncate forward and reve
20 months ago by antonioggsousa 3.2k
0
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0
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1.2k
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Comment: Comment: Is it required for all sequences to be same length when clustering OTUs in metag
21 months ago by antonioggsousa 3.2k
1
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1
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1.2k
views
Answer: Answer: Is it required for all sequences to be same length when clustering OTUs in metag
21 months ago by antonioggsousa 3.2k
0
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1
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944
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Comment: Comment: Does Seurat have Poisson normalization method?
21 months ago by antonioggsousa 3.2k
3
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1
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944
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Answer: Answer: Does Seurat have Pearson Residual (Poisson) normalization method?
21 months ago by antonioggsousa 3.2k
0
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0
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7.9k
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Comment: Comment: Error in Read10X(data.dir
21 months ago by antonioggsousa 3.2k
0
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0
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622
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Comment: Comment: gProfiler: Customising the gostplot
22 months ago by antonioggsousa 3.2k
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1
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1.2k
views
Comment: Comment: Compare two bacterial sequence
23 months ago by antonioggsousa 3.2k
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1
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1.2k
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Comment: Comment: Compare two bacterial sequence
23 months ago by antonioggsousa 3.2k
0
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0
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24k
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Comment: Comment: Adding p value to Vlnplot in Seurat
23 months ago by antonioggsousa 3.2k
1
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1
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24k
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Comment: Comment: Adding p value to Vlnplot in Seurat
23 months ago by antonioggsousa 3.2k
1
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1
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832
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Comment: Comment: Calculate Alpha Diversity out of several Fastq files.
2.1 years ago by antonioggsousa 3.2k
1
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1
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1.3k
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Comment: Comment: Which Sample to use for analysis when I have same sample from different lanes?
2.2 years ago by antonioggsousa 3.2k
1
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1
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1.8k
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Comment: Comment: Predict Functional potential microbial communities - phyloseq Silva
2.2 years ago by antonioggsousa 3.2k
0
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0
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1.6k
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Comment: Comment: Snakemake error in bwahaha pipeline
2.2 years ago by antonioggsousa 3.2k
0
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1
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1.8k
views
Comment: Comment: Predict Functional potential microbial communities - phyloseq Silva
2.2 years ago by antonioggsousa 3.2k
1
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1
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1.6k
views
Comment: Comment: Snakemake error in bwahaha pipeline
2.2 years ago by antonioggsousa 3.2k
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