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Comment: Comment: High Malat-1 expression in single cell data
4 days ago by dsull ★ 6.0k
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831
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Comment: Comment: High Malat-1 expression in single cell data
8 days ago by dsull ★ 6.0k
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319
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Comment: Comment: How does gene length effect the number of reads mapped
8 days ago by dsull ★ 6.0k
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831
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Comment: Comment: High Malat-1 expression in single cell data
8 days ago by dsull ★ 6.0k
0
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1
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319
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Comment: Comment: How does gene length effect the number of reads mapped
8 days ago by dsull ★ 6.0k
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384
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Comment: Comment: What purposes can TPM values be used for?
9 days ago by dsull ★ 6.0k
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446
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Comment: Comment: How should I make kallisto indexes?
12 days ago by dsull ★ 6.0k
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446
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Comment: Comment: How should I make kallisto indexes?
12 days ago by dsull ★ 6.0k
1
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831
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Comment: Comment: High Malat-1 expression in single cell data
12 days ago by dsull ★ 6.0k
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0
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469
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Comment: Comment: What does it mean single base resolution in sequencing?
12 days ago by dsull ★ 6.0k
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1
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469
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Comment: Comment: What does it mean single base resolution in sequencing?
13 days ago by dsull ★ 6.0k
1
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1
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2.1k
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Comment: Comment: NGS forensics: how to know if data is fabricated
14 days ago by dsull ★ 6.0k
2
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1
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2.1k
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Comment: Comment: NGS forensics: how to know if data is fabricated
14 days ago by dsull ★ 6.0k
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780
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Comment: Comment: Heatmap and rna-seq
14 days ago by dsull ★ 6.0k
0
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578
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Comment: Comment: To get p-values for the TPM
16 days ago by dsull ★ 6.0k
1
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1
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578
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Comment: Comment: To get p-values for the TPM
17 days ago by dsull ★ 6.0k
0
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1
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581
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Comment: Comment: Is it Acceptable to Have Uniform Quality Scores in a FASTQ File?
17 days ago by dsull ★ 6.0k
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308
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Comment: Comment: from row count to tpm
19 days ago by dsull ★ 6.0k
1
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202
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Comment: Comment: Help/Direction Needed for Data Analysis of RNA
25 days ago by dsull ★ 6.0k
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1
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570
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Comment: Comment: STARsolo ; Reads are NOT mapped to transcriptome
4 weeks ago by dsull ★ 6.0k
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1
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378
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Comment: Comment: How to to establish haplotype-specific gene expression levels
4 weeks ago by dsull ★ 6.0k
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0
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293
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Comment: Comment: rRNA depletion of RIP-seq samples
4 weeks ago by dsull ★ 6.0k
1
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1
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224
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Comment: Comment: In need of help with my RNA velocity trajectory inference pipeline!
4 weeks ago by dsull ★ 6.0k
1
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0
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284
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Comment: Comment: Removing adapters in all the RNAseq samples regardless if they have or not, is i
5 weeks ago by dsull ★ 6.0k
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0
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559
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Comment: Comment: Installing Cell Ranger
5 weeks ago by dsull ★ 6.0k
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0
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415
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Comment: Comment: DESeq2 and normalization
6 weeks ago by dsull ★ 6.0k
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588
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Comment: Comment: STAR aligner options
6 weeks ago by dsull ★ 6.0k
1
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897
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Comment: Comment: Only one read per run - Trying to use CellRangerv7
6 weeks ago by dsull ★ 6.0k
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1
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588
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Comment: Comment: STAR aligner options
6 weeks ago by dsull ★ 6.0k
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0
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7.2k
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Comment: Comment: Differences between SMART-seq2, SMART-seq3, and 10x
6 weeks ago by dsull ★ 6.0k
0
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1
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7.2k
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Comment: Comment: Differences between SMART-seq2, SMART-seq3, and 10x
6 weeks ago by dsull ★ 6.0k
1
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1
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750
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Comment: Comment: cutadapt not trimming all adapters in PE Illumina sequencing
7 weeks ago by dsull ★ 6.0k
0
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0
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250
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Comment: Comment: DEG (Differential expression gene) analysis
7 weeks ago by dsull ★ 6.0k
3
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1
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380
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Comment: Comment: Average expression of a sample in single-cell data
7 weeks ago by dsull ★ 6.0k
1
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336
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Comment: Comment: RNA-seq bam file normalization
9 weeks ago by dsull ★ 6.0k
2
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0
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382
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Comment: Comment: How I should set `STAR` parameters to keep all the intronic reads?
10 weeks ago by dsull ★ 6.0k
1
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1
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647
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Comment: Comment: Huge decrease of BUS records using bustools
10 weeks ago by dsull ★ 6.0k
0
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1
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281
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Comment: Comment: Why does Phred+ encoding changes after trimming fastq files??
10 weeks ago by dsull ★ 6.0k
0
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0
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621
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Comment: Comment: Making PCA plot using variance instead of counts on Sleuth (plot_pca)
11 weeks ago by dsull ★ 6.0k
2
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0
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521
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Comment: Comment: How does kallisto handle multi mapped reads?
11 weeks ago by dsull ★ 6.0k
0
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2
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521
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Comment: Comment: How does kallisto handle multi mapped reads?
11 weeks ago by dsull ★ 6.0k
0
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1
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591
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Comment: Comment: Differential expression analysis with very high duplication rate
3 months ago by dsull ★ 6.0k
0
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1
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473
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Comment: Comment: How to exclude sex-dependent genes from RNASEQ?
3 months ago by dsull ★ 6.0k
1
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0
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473
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Comment: Comment: How to exclude sex-dependent genes from RNASEQ?
3 months ago by dsull ★ 6.0k
1
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1
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648
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Comment: Comment: Why employ normalization methods, and how can they be utilized in DEG analysis?
3 months ago by dsull ★ 6.0k
2
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1
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647
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Comment: Comment: RNA seq, correlation, gene expression, STAR count
3 months ago by dsull ★ 6.0k
0
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0
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1.1k
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Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by dsull ★ 6.0k
2
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1
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1.1k
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Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by dsull ★ 6.0k
0
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0
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143k
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Comment: Comment: The Biostar Handbook. A bioinformatics e-book for beginners.
3 months ago by dsull ★ 6.0k
0
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0
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1.0k
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 6.0k
426 results • Page 1 of 9
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