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1
vote
1
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580
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Comment:
Comment: Can you suggest a protein PDB that has two chainst but only 50 total number of a
19 days ago by
Pierre Lindenbaum
161k
4
votes
1
reply
580
views
Answer:
Answer: Can you suggest a protein PDB that has two chainst but only 50 total number of a
19 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
286
views
Comment:
Comment: DepMap: siRNA and CRSIPR discrepancy
20 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
328
views
Answer:
Answer: Merging vcf files with bcftools ([E::get_intv] Failed to parse TBX_VCF, was wron
20 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
296
views
Comment:
Comment: True variants selection
20 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
176
views
Comment:
Comment: How to reveal real AF of variant if duplicates can't be removed (such as in ampl
20 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
191
views
Comment:
Comment: Extract Di-nucleotide/Tri-Nucleotide substitution frequencies from MSA/VCF file
21 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
213
views
Comment:
Comment: Finding variants within a subset of a BAM file
21 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
213
views
Answer:
Answer: Finding variants within a subset of a BAM file
21 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
184
views
Comment:
Comment: Help with generating annotation database for dog genome to use in ANNOVAR for v
21 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
212
views
Comment:
Comment: Can't figure out plink --sample-diff
21 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
274
views
Answer:
Answer: Downsampling long-read BAM files
21 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
448
views
Answer:
Answer: Database or Tool: Identifying Gene Regions (Exon/Intron/UTR) from Chromosome Pos
22 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
448
views
Comment:
Comment: Database or Tool: Identifying Gene Regions (Exon/Intron/UTR) from Chromosome Pos
22 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
678
views
Comment:
Comment: Why are the basics so complicated? Basic coverage filtering for VCF files
22 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
311
views
Comment:
Comment: Using GPUs in snakemake
22 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
311
views
Comment:
Comment: Using GPUs in snakemake
22 days ago by
Pierre Lindenbaum
161k
3
votes
0
replies
289
views
Comment:
Comment: Ubuntu storage space is decreasing automatically
22 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
289
views
Comment:
Comment: Ubuntu storage space is decreasing automatically
22 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
146
views
Answer:
Answer: BCFTools install vcfmerge.o error
22 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
350
views
Comment:
Comment: What is the samtools flag used in bamPEFragment?
22 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
218
views
Answer:
Answer: small RNA creating .bam from .sam file
23 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
742
views
Comment:
Comment: bash script
23 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
257
views
Answer:
Answer: latest dbSNP (ncbi) which genome assembly
23 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
171
views
Comment:
Comment: How do I run fastq-dump on multiple prefetched files at once?
24 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
279
views
Comment:
Comment: Regions not clear in VCF
24 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
279
views
Comment:
Comment: Regions not clear in VCF
24 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
383
views
Comment:
Comment: How to I use prefetch (SRAtoolkit) on multiple accessions all at one?
25 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
383
views
Answer:
Answer: How to I use prefetch (SRAtoolkit) on multiple accessions all at one?
25 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
364
views
Comment:
Comment: Help with finding Genomic coordinates and exon they belong to
26 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
364
views
Comment:
Comment: Help with finding Genomic coordinates and exon they belong to
26 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
541
views
Comment:
Comment: Artificial deletion in bam
26 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
564
views
Comment:
Comment: seg fault, core dumped with manta 1.6.0
26 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
636
views
Comment:
Comment: The bioinformatics paper reappears, but the results are significantly different
27 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
541
views
Comment:
Comment: Artificial deletion in bam
27 days ago by
Pierre Lindenbaum
161k
2
votes
2
replies
541
views
Answer:
Answer: Artificial deletion in bam
27 days ago by
Pierre Lindenbaum
161k
1
vote
0
replies
244
views
Comment:
Comment: Trying to write bwa mem -> samtools view -> samtools sort loop
27 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
353
views
Comment:
Comment: Tool to Identify Gene, Regulatory Role, and Function at Integration Sites
27 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
348
views
Comment:
Comment: Incongruencies in GT assignment by Freebayes
27 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
353
views
Comment:
Comment: Tool to Identify Gene, Regulatory Role, and Function at Integration Sites
27 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
348
views
Comment:
Comment: Incongruencies in GT assignment by Freebayes
27 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
567
views
Comment:
Comment: FreeBayes encountered a sudden error
27 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
564
views
Comment:
Comment: frequency of each variant per sample
27 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
567
views
Comment:
Comment: FreeBayes encountered a sudden error
27 days ago by
Pierre Lindenbaum
161k
2
votes
1
reply
353
views
Answer:
Answer: Tool to Identify Gene, Regulatory Role, and Function at Integration Sites
27 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
267
views
Comment:
Comment: filtering VCF sites and impose whatever excluded ad missing
27 days ago by
Pierre Lindenbaum
161k
2
votes
1
reply
267
views
Answer:
Answer: filtering VCF sites and impose whatever excluded ad missing
27 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
564
views
Comment:
Comment: frequency of each variant per sample
27 days ago by
Pierre Lindenbaum
161k
1
vote
1
reply
564
views
Answer:
Answer: frequency of each variant per sample
27 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
240
views
Comment:
Comment: Data table for LOEUF loss-of-function observed/expected upper bound fraction
28 days ago by
Pierre Lindenbaum
161k
12,422 results • Page
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