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2
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1
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588
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Comment:
Comment: Filtering sam or bam file with maximum matching region
26 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
320
views
Comment:
Comment: bam merging for archaic samples
26 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
554
views
Comment:
Comment: python file for cpc2
28 days ago by
Pierre Lindenbaum
161k
0
votes
1
reply
941
views
Comment:
Comment: How can I retrieve wheat lysine non-acetylated sequences from the UniProt databa
28 days ago by
Pierre Lindenbaum
161k
0
votes
0
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999
views
Comment:
Comment: Questions about a bug when transferring cram file to bam file
29 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
999
views
Comment:
Comment: Questions about a bug when transferring cram file to bam file
29 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
223
views
Comment:
Comment: Freyja plot error
29 days ago by
Pierre Lindenbaum
161k
0
votes
0
replies
365
views
Comment:
Comment: Merging vcf files with bcftools ([E::get_intv] Failed to parse TBX_VCF, was wron
29 days ago by
Pierre Lindenbaum
161k
2
votes
0
replies
364
views
Comment:
Comment: Bioinformatics_where do i start
updated 4 weeks ago by
GenoMax
142k • written 4 weeks ago by
Pierre Lindenbaum
161k
1
vote
1
reply
570
views
Comment:
Comment: Where to find the homopolymer regions bed file for Hg002 genome?
4 weeks ago by
Pierre Lindenbaum
161k
1
vote
0
replies
570
views
Comment:
Comment: Where to find the homopolymer regions bed file for Hg002 genome?
4 weeks ago by
Pierre Lindenbaum
161k
1
vote
1
reply
457
views
Comment:
Comment: Best way to deal with overlapping read names in merged BAM files
4 weeks ago by
Pierre Lindenbaum
161k
1
vote
0
replies
1.3k
views
Comment:
Comment: VCF to human friendly form?
4 weeks ago by
Pierre Lindenbaum
161k
1
vote
0
replies
431
views
Comment:
Comment: How to download large-scale cDNA sequences from NCBI effectively ?
4 weeks ago by
Pierre Lindenbaum
161k
1
vote
1
reply
637
views
Comment:
Comment: Can you suggest a protein PDB that has two chainst but only 50 total number of a
4 weeks ago by
Pierre Lindenbaum
161k
1
vote
1
reply
306
views
Comment:
Comment: DepMap: siRNA and CRSIPR discrepancy
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
323
views
Comment:
Comment: True variants selection
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
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193
views
Comment:
Comment: How to reveal real AF of variant if duplicates can't be removed (such as in ampl
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
200
views
Comment:
Comment: Extract Di-nucleotide/Tri-Nucleotide substitution frequencies from MSA/VCF file
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
272
views
Comment:
Comment: Finding variants within a subset of a BAM file
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
270
views
Comment:
Comment: Help with generating annotation database for dog genome to use in ANNOVAR for v
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
238
views
Comment:
Comment: Can't figure out plink --sample-diff
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
483
views
Comment:
Comment: Database or Tool: Identifying Gene Regions (Exon/Intron/UTR) from Chromosome Pos
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
724
views
Comment:
Comment: Why are the basics so complicated? Basic coverage filtering for VCF files
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
338
views
Comment:
Comment: Using GPUs in snakemake
5 weeks ago by
Pierre Lindenbaum
161k
1
vote
0
replies
338
views
Comment:
Comment: Using GPUs in snakemake
5 weeks ago by
Pierre Lindenbaum
161k
3
votes
0
replies
328
views
Comment:
Comment: Ubuntu storage space is decreasing automatically
5 weeks ago by
Pierre Lindenbaum
161k
1
vote
0
replies
328
views
Comment:
Comment: Ubuntu storage space is decreasing automatically
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
374
views
Comment:
Comment: What is the samtools flag used in bamPEFragment?
5 weeks ago by
Pierre Lindenbaum
161k
1
vote
1
reply
822
views
Comment:
Comment: bash script
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
184
views
Comment:
Comment: How do I run fastq-dump on multiple prefetched files at once?
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
292
views
Comment:
Comment: Regions not clear in VCF
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
292
views
Comment:
Comment: Regions not clear in VCF
5 weeks ago by
Pierre Lindenbaum
161k
1
vote
0
replies
423
views
Comment:
Comment: How to I use prefetch (SRAtoolkit) on multiple accessions all at one?
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
380
views
Comment:
Comment: Help with finding Genomic coordinates and exon they belong to
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
380
views
Comment:
Comment: Help with finding Genomic coordinates and exon they belong to
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
572
views
Comment:
Comment: Artificial deletion in bam
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
635
views
Comment:
Comment: seg fault, core dumped with manta 1.6.0
5 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
670
views
Comment:
Comment: The bioinformatics paper reappears, but the results are significantly different
6 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
572
views
Comment:
Comment: Artificial deletion in bam
6 weeks ago by
Pierre Lindenbaum
161k
1
vote
0
replies
266
views
Comment:
Comment: Trying to write bwa mem -> samtools view -> samtools sort loop
6 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
379
views
Comment:
Comment: Tool to Identify Gene, Regulatory Role, and Function at Integration Sites
6 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
372
views
Comment:
Comment: Incongruencies in GT assignment by Freebayes
6 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
379
views
Comment:
Comment: Tool to Identify Gene, Regulatory Role, and Function at Integration Sites
6 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
372
views
Comment:
Comment: Incongruencies in GT assignment by Freebayes
6 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
621
views
Comment:
Comment: FreeBayes encountered a sudden error
6 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
606
views
Comment:
Comment: frequency of each variant per sample
6 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
621
views
Comment:
Comment: FreeBayes encountered a sudden error
6 weeks ago by
Pierre Lindenbaum
161k
0
votes
0
replies
286
views
Comment:
Comment: filtering VCF sites and impose whatever excluded ad missing
6 weeks ago by
Pierre Lindenbaum
161k
0
votes
1
reply
606
views
Comment:
Comment: frequency of each variant per sample
6 weeks ago by
Pierre Lindenbaum
161k
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