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Answer: Answer: F*up Night style events for Bioinformatics ? Comment if you're interested!
7 weeks ago by Pierre Lindenbaum 161k
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Answer: Answer: diffbind : killed dba.count(DBsample, bParallel=FALSE)
7 weeks ago by Pierre Lindenbaum 161k
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408
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Answer: Answer: calculate mismatch rate from VCF file
7 weeks ago by Pierre Lindenbaum 161k
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323
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Answer: Answer: Confirm if a genome position falls into a coding exon
7 weeks ago by Pierre Lindenbaum 161k
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432
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Answer: Answer: 0-based coordinates from samtools depth
7 weeks ago by Pierre Lindenbaum 161k
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737
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Answer: Answer: Variant calling of GBS data
7 weeks ago by Pierre Lindenbaum 161k
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737
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Answer: Answer: How to filter Illumina Nirvana variant annotation?
7 weeks ago by Pierre Lindenbaum 161k
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415
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Answer: Answer: What is meant by 'genomic order' in gatk's GatherVcfs, and how do I check for it
7 weeks ago by Pierre Lindenbaum 161k
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559
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Answer: Answer: I have a bed file containing genomic locations and A or B compartment annotation
8 weeks ago by Pierre Lindenbaum 161k
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295
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Answer: Answer: Annotating indels and SNVs
8 weeks ago by Pierre Lindenbaum 161k
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402
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Answer: Answer: HISAT2 installation issue
8 weeks ago by Pierre Lindenbaum 161k
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452
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Answer: Answer: bcftools select sites with multiple combinatio ns of FILTER column
8 weeks ago by Pierre Lindenbaum 161k
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641
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Answer: Answer: Fine-tuning NCBI taxid / taxidlist
8 weeks ago by Pierre Lindenbaum 161k
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340
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Answer: Answer: Annotate genes from gtf file to vcf file
8 weeks ago by Pierre Lindenbaum 161k
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545
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Answer: Answer: bedToBigBed error, what am I doing wrong?
8 weeks ago by Pierre Lindenbaum 161k
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438
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Answer: Answer: Biostrings extract read
8 weeks ago by Pierre Lindenbaum 161k
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460
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Answer: Answer: How to add FORMAT/TAG = "." to all samples in a vcf file via bcftools?
8 weeks ago by Pierre Lindenbaum 161k
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350
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Answer: Answer: error in wigToBigWig while converting mappability to bedgraph
8 weeks ago by Pierre Lindenbaum 161k
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260
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Answer: Answer: Problem with .bed file
8 weeks ago by Pierre Lindenbaum 161k
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392
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Answer: Answer: Can't use VarScan2 to call somatic variants from my tumor/sample vcf pair
9 weeks ago by Pierre Lindenbaum 161k
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245
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Answer: Answer: converting VCF files to TSV file
9 weeks ago by Pierre Lindenbaum 161k
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291
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Answer: Answer: Bed file filtering
9 weeks ago by Pierre Lindenbaum 161k
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277
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Answer: Answer: Query Name too long - samtools
9 weeks ago by Pierre Lindenbaum 161k
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277
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Answer: Answer: Merging 2 VCF files using bcftools, however how should I update the fields accor
9 weeks ago by Pierre Lindenbaum 161k
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583
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Answer: Answer: i'm trying to use STAR and there is a problem...
9 weeks ago by Pierre Lindenbaum 161k
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695
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Answer: Answer: Warning: Expected at least 2 parts in FORMAT entry: ID=GP,Number=3,Type=Float,De
9 weeks ago by Pierre Lindenbaum 161k
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437
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Answer: Answer: How to merge VCF files from multiple samples and remove individual level informa
10 weeks ago by Pierre Lindenbaum 161k
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Answer: Answer: Coovar: Co-Occurring Variant Analyzer
10 weeks ago by Pierre Lindenbaum 161k
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478
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Answer: Answer: Issues filtering VCF file with bcftools/vcftools
10 weeks ago by Pierre Lindenbaum 161k
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423
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Answer: Answer: Uploading HiC track on UCSC browser
10 weeks ago by Pierre Lindenbaum 161k
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233
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Answer: Answer: How does one create a custom VCF file?
10 weeks ago by Pierre Lindenbaum 161k
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423
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Answer: Answer: blast in python
10 weeks ago by Pierre Lindenbaum 161k
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254
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Answer: Answer: How to get population specific SNPs from a vcf file
10 weeks ago by Pierre Lindenbaum 161k
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488
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Answer: Answer: Selection of GTF file from gencode
11 weeks ago by Pierre Lindenbaum 161k
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371
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Answer: Answer: GnomAD
11 weeks ago by Pierre Lindenbaum 161k
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500
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Answer: Answer: CollectVariantCallingMetrics Error
11 weeks ago by Pierre Lindenbaum 161k
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404
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Answer: Answer: how to remove FORMAT field in vcf field
11 weeks ago by Pierre Lindenbaum 161k
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345
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Answer: Answer: get flanking sequences of a SNP in a vcf
11 weeks ago by Pierre Lindenbaum 161k
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423
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Answer: Answer: Would a string composed of `#CHROM`, `POS`, `REF` and `ALT` uniquely identify a
11 weeks ago by Pierre Lindenbaum 161k
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538
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Answer: Answer: Maximum returned records using epost?
12 weeks ago by Pierre Lindenbaum 161k
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623
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Answer: Answer: Bcftools view error
12 weeks ago by Pierre Lindenbaum 161k
2
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824
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Answer: Answer: It's my first time doing alignment and i keep getting this message, is this norm
12 weeks ago by Pierre Lindenbaum 161k
1
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664
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Answer: Answer: Separating bam file based on directionality / samtools view -F/-f option(s) appe
12 weeks ago by Pierre Lindenbaum 161k
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469
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Answer: Answer: genomecov -d -pc -ibam showing no coverage for every position
3 months ago by Pierre Lindenbaum 161k
5
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538
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Answer: Answer: samtools index error - "Unsorted positions on sequence" even though file is sort
3 months ago by Pierre Lindenbaum 161k
2
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543
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Answer: Answer: Extract SNPs present in mutants
3 months ago by Pierre Lindenbaum 161k
3
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372
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Answer: Answer: How to exclude reads from a fastq file, using a list of read names?
3 months ago by Pierre Lindenbaum 161k
2
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677
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Answer: Answer: Split large deletion D in CIGAR string and filtering reads
3 months ago by Pierre Lindenbaum 161k
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373
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Answer: Answer: line 1: syntax error near unexpected token `Rsubread
3 months ago by Pierre Lindenbaum 161k
3
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606
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Answer: Answer: Creating a csv in a specific format from FASTQ file names
3 months ago by Pierre Lindenbaum 161k
4,703 results • Page 2 of 95
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