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Question about ENCODE ATAC-seq bed file, bed narrowPeak vs bed idr_ranked_peak
ATAC-seq
3.2 years ago by yanweng ▴ 80
2
votes
8
replies
1.4k
views
Identify TF binding motif for a given gene
RNA-Seq ChIP-Seq genome sequencing gene
4.2 years ago by yanweng ▴ 80
5
votes
2
replies
2.7k
views
Homer software -size parameter
ChIP-Seq sequencing gene ATAC-seq
4.3 years ago by yanweng ▴ 80
4
votes
4
replies
2.9k
views
Paired-end RNA sequence - which read is complimentary?
RNA-Seq next-gen sequence gene
updated 22 months ago by 43k • written 8.3 years ago by ▴ 80
1
vote
4
replies
2.4k
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Samtools 1.3 mpileup result < >
RNA-Seq sequencing next-gen samtools pileup
updated 5.7 years ago by 43k • written 8.3 years ago by ▴ 80
1
vote
0
replies
1.6k
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Use PacBio's iso-seq data to look for variant
SNP sequencing next-gen
updated 5.8 years ago by 20 • written 8.0 years ago by ▴ 80
5
votes
8
replies
4.4k
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In RNA-seq data, how to find whether the mRNA is on the forward strand or reverse strand?
RNA-Seq rna-seq genome next-gen alignment
updated 8.0 years ago by 104k • written 8.0 years ago by ▴ 80
0
votes
0
replies
1.4k
views
Score column of GeneMarkS
Assembly genome gene sequence
updated 13 months ago by 43k • written 8.1 years ago by ▴ 80
7
votes
4
replies
5.1k
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How does a read, which is complementary to the reference genome, map to the reference?
RNA-Seq genome next-gen-sequencing alignment
updated 22 months ago by 43k • written 8.3 years ago by ▴ 80
9 results • Page 1 of 1
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