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Comment:
Comment: How to find rna strand direction before alignment?
17 months ago by
benformatics
3.9k
0
votes
1
reply
8.2k
views
Comment:
Comment: CPM or TPM in GSEA analysis
17 months ago by
benformatics
3.9k
0
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1
reply
966
views
Comment:
Comment: Proportion of mitochondrial reads atac seq
18 months ago by
benformatics
3.9k
1
vote
0
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1.9k
views
Comment:
Comment: How much RAM for scRNAseq 200K cells?
18 months ago by
benformatics
3.9k
0
votes
0
replies
909
views
Comment:
Comment: scRNA-Seq datasets with labels
18 months ago by
benformatics
3.9k
0
votes
1
reply
556
views
Comment:
Comment: Does chemistry have significant effects on my single nucleus dataset?
18 months ago by
benformatics
3.9k
1
vote
0
replies
920
views
Comment:
Comment: How can I get counts from transgenic expression in RNA-seq data?
19 months ago by
benformatics
3.9k
0
votes
0
replies
842
views
Comment:
Comment: Why an extremely large number of reads are mapped to several chromosomes in RNA-
19 months ago by
benformatics
3.9k
1
vote
1
reply
909
views
Comment:
Comment: scRNA-Seq datasets with labels
19 months ago by
benformatics
3.9k
1
vote
0
replies
1.7k
views
Comment:
Comment: Quantseq 3' seq alignment with kallisto
19 months ago by
benformatics
3.9k
0
votes
0
replies
1.2k
views
Comment:
Comment: convert a list of plotly plots to an HTML output
19 months ago by
benformatics
3.9k
0
votes
1
reply
2.4k
views
Comment:
Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
19 months ago by
benformatics
3.9k
0
votes
1
reply
992
views
Comment:
Comment: Public availability of de-identified patient data
19 months ago by
benformatics
3.9k
0
votes
0
replies
490
views
Comment:
Comment: Error in mitch reports in R
19 months ago by
benformatics
3.9k
0
votes
0
replies
1.7k
views
Comment:
Comment: Unaligned Reads From Bowtie2
19 months ago by
benformatics
3.9k
0
votes
1
reply
2.4k
views
Comment:
Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
19 months ago by
benformatics
3.9k
0
votes
0
replies
929
views
Comment:
Comment: Allele flip in GATK
19 months ago by
benformatics
3.9k
0
votes
1
reply
1.7k
views
Comment:
Comment: Unaligned Reads From Bowtie2
19 months ago by
benformatics
3.9k
0
votes
0
replies
2.6k
views
Comment:
Comment: star --readFilesIn error when using unmapped.out.mate1/2 files
19 months ago by
benformatics
3.9k
1
vote
1
reply
2.4k
views
Comment:
Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
19 months ago by
benformatics
3.9k
1
vote
0
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561
views
Comment:
Comment: Manually adding genes of interest to transcriptome for RNASeq DE?
20 months ago by
benformatics
3.9k
0
votes
0
replies
640
views
Comment:
Comment: How to analyse different sample number fastq files
20 months ago by
benformatics
3.9k
1
vote
0
replies
1.5k
views
Comment:
Comment: rMATS reads used is zero (0)
20 months ago by
benformatics
3.9k
0
votes
1
reply
1.5k
views
Comment:
Comment: rMATS reads used is zero (0)
20 months ago by
benformatics
3.9k
0
votes
1
reply
2.4k
views
Comment:
Comment: Find ~1 Mb regions of genome that are shared by two or more WGS samples?
20 months ago by
benformatics
3.9k
0
votes
1
reply
1.0k
views
Comment:
Comment: 5' and 3' UTRs in RNA regulation
20 months ago by
benformatics
3.9k
1
vote
0
replies
908
views
Comment:
Comment: Identifying tumor vs normal cells in scRNAseq samples
20 months ago by
benformatics
3.9k
0
votes
0
replies
855
views
Comment:
Comment: When a gene "fails" (ie doesn't express optimally or at all), does another gene
20 months ago by
benformatics
3.9k
0
votes
0
replies
1.1k
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Comment:
Comment: Leaky RNA
21 months ago by
benformatics
3.9k
2
votes
1
reply
35k
views
Comment:
Comment: read depth using samtools
21 months ago by
benformatics
3.9k
0
votes
1
reply
35k
views
Comment:
Comment: read depth using samtools
21 months ago by
benformatics
3.9k
1
vote
0
replies
440
views
Comment:
Comment: Statistical test to decide key clusters
21 months ago by
benformatics
3.9k
1
vote
0
replies
749
views
Comment:
Comment: Difference in sashimi plot between single-cell versus bulk RNA-seq data
21 months ago by
benformatics
3.9k
0
votes
1
reply
4.2k
views
Comment:
Comment: Extract reads from BAM file with known variant
22 months ago by
benformatics
3.9k
0
votes
1
reply
4.2k
views
Comment:
Comment: Extract reads from BAM file with known variant
22 months ago by
benformatics
3.9k
0
votes
0
replies
4.2k
views
Comment:
Comment: Extract reads from BAM file with known variant
22 months ago by
benformatics
3.9k
0
votes
1
reply
4.2k
views
Comment:
Comment: Extract reads from BAM file with known variant
22 months ago by
benformatics
3.9k
0
votes
1
reply
4.2k
views
Comment:
Comment: Extract reads from BAM file with known variant
22 months ago by
benformatics
3.9k
0
votes
1
reply
4.2k
views
Comment:
Comment: Extract reads from BAM file with known variant
22 months ago by
benformatics
3.9k
0
votes
1
reply
4.2k
views
Comment:
Comment: Extract reads from BAM file with known variant
22 months ago by
benformatics
3.9k
0
votes
1
reply
597
views
Comment:
Comment: Identifying and quantifying transcript variants in RNA-seq data
22 months ago by
benformatics
3.9k
0
votes
0
replies
584
views
Comment:
Comment: Spiking variants into BAM file
22 months ago by
benformatics
3.9k
0
votes
0
replies
659
views
Comment:
Comment: resolving specific clusters from data (spectral clustering)
22 months ago by
benformatics
3.9k
0
votes
0
replies
734
views
Comment:
Comment: 3 reads with the same ID in sam file
23 months ago by
benformatics
3.9k
0
votes
1
reply
1.4k
views
Comment:
Comment: Mitochondrial genes as Seurat markers in nuclear sequencing data
23 months ago by
benformatics
3.9k
0
votes
0
replies
1.8k
views
Comment:
Comment: Read counts an order of magnitude higher on one chromosome
24 months ago by
benformatics
3.9k
1
vote
1
reply
1.8k
views
Comment:
Comment: Read counts an order of magnitude higher on one chromosome
24 months ago by
benformatics
3.9k
1
vote
0
replies
12k
views
Comment:
Comment: Can Illumina bcl2fastq use only one index for demultiplexing dual index sequenci
24 months ago by
benformatics
3.9k
0
votes
1
reply
12k
views
Comment:
Comment: Can Illumina bcl2fastq use only one index for demultiplexing dual index sequenci
24 months ago by
benformatics
3.9k
1
vote
3
replies
1.7k
views
Comment:
Comment: Amino Acid identity matrix help
2.0 years ago by
benformatics
3.9k
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