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Thomas
Thomas
Reputation:
180
Joined:
10.6 years ago
Last seen:
3.8 years ago
Location:
Cambridge, UK
Latest posts by user
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Comment: Comment: Align Illumina short reads to a subset of human reference genome
written by Thomas Thomas
2 votes
1 reply
0 views
Answer: Answer: Align Illumina short reads to a subset of human reference genome
written by Thomas Thomas
0 votes
0 replies
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Comment: Comment: Looking for a tool which provides mapping quality score distributions from BAM f
written by Thomas Thomas
0 votes
1 reply
0 views
Comment: Comment: Looking for a tool which provides mapping quality score distributions from BAM f
written by Thomas Thomas
0 votes
0 replies
0 views
Comment: Comment: Looking for a tool which provides mapping quality score distributions from BAM f
written by Thomas Thomas
0 votes
0 replies
0 views
Comment: Comment: Looking for a tool which provides mapping quality score distributions from BAM f
written by Thomas Thomas
0 votes
0 replies
0 views
Comment: Comment: Looking for a tool which provides mapping quality score distributions from BAM f
written by Thomas Thomas
6 votes
10 replies
9.1K views
Looking for a tool which provides mapping quality score distributions from BAM files
picard samtools multiqc
written by Thomas Thomas
2 votes
1 reply
1.7K views
What does samtools mean by 'orientation' when marking duplicates?
read_orientation samtools htslib
updated by aw7 • aw7 • written by Thomas Thomas
1 vote
0 replies
0 views
Answer: A: which is better for rna-seq analysis? R or python?
written by Thomas Thomas
0 votes
0 replies
0 views
Comment: C: Problem starting and running Gmaj (MAF file viewer and manipulator)
written by Thomas Thomas
0 votes
3 replies
2.2K views
Salmon: Any downstream DEA tools which uses abundance estimate variation information?
salmon deseq2
updated by ATpoint ATpoint • written by Thomas Thomas
0 votes
0 replies
1.5K views
Annotate pairwise alignment with query sequence quality scores
alignment quality scores
written by Thomas Thomas
0 votes
1 reply
0 views
Comment: C: kallisto: strand-specific and fragment length calculation
written by Thomas Thomas
1 vote
0 replies
0 views
Answer: A: Trouble running vcf2phyloviz.py
written by Thomas Thomas
0 votes
1 reply
2.0K views
Trouble running vcf2phyloviz.py
vcf2phyloviz vcf pyvcf
written by Thomas Thomas
0 votes
0 replies
0 views
Comment: C: Mauve aligner without SML files
written by Thomas Thomas
1 vote
0 replies
0 views
Comment: C: Getting average fragment length for single end reads
written by Thomas Thomas
0 votes
0 replies
2.1K views
freebayes VCF output (FREQ header)
freebayes vcf
written by Thomas Thomas
0 votes
0 replies
0 views
Comment: C: Problem using MIRZA (miRNA target prediction tool)
written by Thomas Thomas
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