Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
1
reply
933
views
Comment: Comment: Create a new bed file with all pairwise combinations between two other bed files
3 days ago by Alex Reynolds 35k
0
votes
0
replies
501
views
Comment: Comment: Overlapping Ranges within Granges object
6 days ago by Alex Reynolds 35k
0
votes
1
reply
501
views
Answer: Answer: Overlapping Ranges within Granges object
10 days ago by Alex Reynolds 35k
0
votes
0
replies
343
views
Comment: Comment: Bedtools merge minimum overlap?
21 days ago by Alex Reynolds 35k
2
votes
2
replies
933
views
Answer: Answer: Create a new bed file with all pairwise combinations between two other bed files
27 days ago by Alex Reynolds 35k
3
votes
1
reply
2.3k
views
Comment: Comment: Bioinformatician who was retaliated against after reporting discriminatory haras
5 weeks ago by Alex Reynolds 35k
1
vote
0
replies
347
views
Answer: Answer: How to highlight genes on genome visual reprezentation/what tool to use?
5 weeks ago by Alex Reynolds 35k
1
vote
0
replies
7.8k
views
Comment: Comment: Intersect multiple BED files
8 weeks ago by Alex Reynolds 35k
0
votes
1
reply
480
views
Comment: Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
8 weeks ago by Alex Reynolds 35k
0
votes
0
replies
377
views
Answer: Answer: Error occurs when migrate-n software performs "make mpis"
8 weeks ago by Alex Reynolds 35k
0
votes
1
reply
480
views
Comment: Comment: Coverage depth map of genome from multiple sample coverage bedgraphs?
8 weeks ago by Alex Reynolds 35k
1
vote
1
reply
480
views
Answer: Answer: Coverage depth map of genome from multiple sample coverage bedgraphs?
8 weeks ago by Alex Reynolds 35k
0
votes
0
replies
854
views
Answer: Answer: Convert Gene symbol to Ensembl ID
10 weeks ago by Alex Reynolds 35k
1
vote
0
replies
505
views
Comment: Comment: Genes with multiple chromosome locations
11 weeks ago by Alex Reynolds 35k
0
votes
1
reply
854
views
Comment: Comment: Convert Gene symbol to Ensembl ID
11 weeks ago by Alex Reynolds 35k
0
votes
1
reply
854
views
Comment: Comment: Convert Gene symbol to Ensembl ID
11 weeks ago by Alex Reynolds 35k
0
votes
0
replies
18k
views
Comment: Comment: BEDOPS gtf2bed conversion error with Ensembl GTF
12 weeks ago by Alex Reynolds 35k
0
votes
0
replies
506
views
Comment: Comment: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
3 months ago by Alex Reynolds 35k
2
votes
0
replies
506
views
Answer: Answer: line 164: 15342 Segmentation fault (core dumped) ${cmd} ${options} - 0<&0
3 months ago by Alex Reynolds 35k
0
votes
0
replies
869
views
Comment: Comment: Random Access remote BAM files
3 months ago by Alex Reynolds 35k
0
votes
1
reply
869
views
Comment: Comment: Random Access remote BAM files
3 months ago by Alex Reynolds 35k
0
votes
1
reply
869
views
Comment: Comment: Random Access remote BAM files
3 months ago by Alex Reynolds 35k
1
vote
1
reply
869
views
Answer: Answer: Random Access remote BAM files
3 months ago by Alex Reynolds 35k
2
votes
1
reply
485
views
Answer: Answer: Double counts with bedtools intersect?
4 months ago by Alex Reynolds 35k
0
votes
0
replies
1.4k
views
Comment: Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
4 months ago by Alex Reynolds 35k
0
votes
1
reply
1.4k
views
Comment: Comment: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
4 months ago by Alex Reynolds 35k
1
vote
1
reply
1.4k
views
Answer: Answer: Some lines are not well organized in BED file, how to correct them ? Thanks a lo
4 months ago by Alex Reynolds 35k
0
votes
0
replies
396
views
Answer: Answer: identify genes
4 months ago by Alex Reynolds 35k
1
vote
2
replies
1.9k
views
Comment: Comment: PanDepth, an ultra-fast and efficient genomic tool for coverage calculation
5 months ago by Alex Reynolds 35k
0
votes
0
replies
640
views
Comment: Comment: Where can I get a list of SNPs mapping overlapping genes in humans?
5 months ago by Alex Reynolds 35k
0
votes
0
replies
640
views
Comment: Comment: Where can I get a list of SNPs mapping overlapping genes in humans?
5 months ago by Alex Reynolds 35k
3
votes
2
replies
640
views
Answer: Answer: Where can I get a list of SNPs mapping overlapping genes in humans?
5 months ago by Alex Reynolds 35k
0
votes
1
reply
3.6k
views
Comment: Comment: Decoding MM and ML tags in .SAM file
6 months ago by Alex Reynolds 35k
1
vote
0
replies
834
views
Answer: Answer: Filter a BED file based on genome coordinates for gene names
6 months ago by Alex Reynolds 35k
1
vote
0
replies
436
views
Answer: Answer: distance between chip peaks and individual TSS
6 months ago by Alex Reynolds 35k
0
votes
0
replies
645
views
Answer: Answer: Simple tools for creation of figures of gene and protein structure
6 months ago by Alex Reynolds 35k
0
votes
0
replies
546
views
Answer: Answer: Visualize raw rna fastq file and aligned bam file
7 months ago by Alex Reynolds 35k
1
vote
1
reply
6.2k
views
Comment: Comment: Macbook M1 pro/M2 pro or Dell (with Ubuntu/other linux distribution) for bioinfo
7 months ago by Alex Reynolds 35k
0
votes
1
reply
1.3k
views
Comment: Comment: Getting the overlap between two GTF files
7 months ago by Alex Reynolds 35k
0
votes
1
reply
1.3k
views
Comment: Comment: Getting the overlap between two GTF files
7 months ago by Alex Reynolds 35k
0
votes
0
replies
1.3k
views
Answer: Answer: Getting the overlap between two GTF files
7 months ago by Alex Reynolds 35k
1
vote
1
reply
689
views
Comment: Comment: Mapping SNP rsIds/ positions to genes coding for proteins
7 months ago by Alex Reynolds 35k
1
vote
1
reply
689
views
Answer: Answer: Mapping SNP rsIds/ positions to genes coding for proteins
7 months ago by Alex Reynolds 35k
0
votes
0
replies
785
views
Answer: Answer: BED files
8 months ago by Alex Reynolds 35k
1
vote
1
reply
961
views
Comment: Comment: Filter human transcription factors
8 months ago by Alex Reynolds 35k
0
votes
1
reply
1.7k
views
Comment: Comment: Read block operation failed with BAM file
8 months ago by Alex Reynolds 35k
0
votes
0
replies
471
views
Answer: Answer: Visualize where kmers are on a reference genome
8 months ago by Alex Reynolds 35k
0
votes
0
replies
1.7k
views
Comment: Comment: Read block operation failed with BAM file
8 months ago by Alex Reynolds 35k
2
votes
8
replies
1.7k
views
Read block operation failed with BAM file
bgzip samtools bam pysam htslib
updated 8 months ago by 3.0k • written 8 months ago by 35k
2
votes
0
replies
775
views
Answer: Answer: Create 10,000bp windows for a SNP file and assign each SNP to its respective win
8 months ago by Alex Reynolds 35k
2,877 results • Page 1 of 58
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6