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John Marshall
John Marshall
Role:
Moderator
Reputation:
3,080
Joined:
14.6 years ago
Last seen:
1.0 years ago
Location:
New Zealand
Twitter:
jomarnz
Latest posts by user
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Comment: Comment: Issues installing bcftools with GNU Scientific Library
written by John Marshall John Marshall
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Comment: Comment: Issues installing bcftools with GNU Scientific Library
written by John Marshall John Marshall
1 vote
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Comment: Comment: Issues installing bcftools with GNU Scientific Library
written by John Marshall John Marshall
1 vote
1 reply
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Answer: Answer: I got qlen = 276 using bam_cigar2qlen in htslib but I count that cigar by myself
written by John Marshall John Marshall
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Answer: Answer: when I use htslib to write a bam. Error of "truncated file" shows by samtools
written by John Marshall John Marshall
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Comment: Comment: I am unsure why my files are not being accepted in bedtools jaccard, any tips?
written by John Marshall John Marshall
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Comment: Comment: sam format in the emboss water program
written by John Marshall John Marshall
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Comment: Comment: sam format in the emboss water program
written by John Marshall John Marshall
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Comment: Comment: sam format in the emboss water program
written by John Marshall John Marshall
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Comment: Comment: Read block operation failed with BAM file
written by John Marshall John Marshall
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Comment: Comment: Read block operation failed with BAM file
written by John Marshall John Marshall
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Answer: Answer: Read block operation failed with BAM file
written by John Marshall John Marshall
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Answer: Answer: bcftools view -r issue
written by John Marshall John Marshall
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1 reply
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Answer: Answer: Using Bioconda with Mac M1 Processor?
written by John Marshall John Marshall
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Answer: Answer: from .BAM to .BAI using samtools
written by John Marshall John Marshall
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Comment: Comment: samtools install error
written by John Marshall John Marshall
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Answer: Answer: samtools install error
written by John Marshall John Marshall
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Comment: Comment: Tabix '[E::get_intv] Failed to parse TBX_VCF' error
written by John Marshall John Marshall
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Answer: Answer: How to efficiently remove a list of reads from BAM file?
written by John Marshall John Marshall
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Comment: Comment: Tabix '[E::get_intv] Failed to parse TBX_VCF' error
written by John Marshall John Marshall
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