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erica.fary
erica.fary
Reputation:
20 (New)
Joined:
11.1 years ago
Last seen:
4.6 years ago
Location:
Switzerland
Latest posts by user
0 votes
0 replies
637 views
no matching between KEGG "nt" and "N" entries ?!
pathway kegg network
written by erica.fary 2
0 votes
0 replies
703 views
KEGG pathway: "nt..." network filtering from KEGG entry to KEGG pathway figure
pathway kegg
written by erica.fary 2
0 votes
0 replies
974 views
limma: correct design matrix and topTable for 2 way comparison
edge r differential rna-seq limma expression
written by erica.fary 2
0 votes
0 replies
0 views
Comment: Comment: TCGA data: low / high grade ovarian cancer
written by erica.fary 2
0 votes
2 replies
1.6K views
TCGA data: low / high grade ovarian cancer
recout2 tcgabiolinks tcga r
written by erica.fary 2
0 votes
1 reply
0 views
Comment: Comment: Differential expression analysis between normal/cancer on recount2 data
written by erica.fary 2
2 votes
3 replies
2.3K views
Differential expression analysis between normal/cancer on recount2 data
recount gtex tcga rna-seq batch
updated by Kevin Blighe 9.0K • | written by erica.fary 2
0 votes
1 reply
3.5K views
Download TCGA and GTEX data from Xena toilHub for (full genome but for 1 cancer/tissue type)
gtex ucscxenatools tcga rna-seq xena
updated by dsull 781 • | written by erica.fary 2
0 votes
1 reply
2.3K views
TCGAbiolinks: which normalization before differential expression analysis (legacy=TRUE vs. legacy=FALSE)
tcgabiolinks limma tcga rna-seq normalization
updated by fracarb8 176 • | written by erica.fary 2
0 votes
0 replies
896 views
Comparison of ChIP-seq tracks from two cell lines using FC over control (ENCODE data)
chip-seq h3k27ac bigwig encode
written by erica.fary 2
0 votes
1 reply
0 views
Comment: C: Retrieve nt sequence of chloroplaste genes (NCBI query with gene name and taxon
written by erica.fary 2
0 votes
3 replies
3.8K views
Retrieve nt sequence of chloroplaste genes (NCBI query with gene name and taxon ID)
ncbi database gene sequence
written by erica.fary 2
0 votes
0 replies
3.1K views
Pairwise distances DNA sequences (K80 model of DNA evolution) [Python]
phylogeny python sequence
updated by Ram 4.5K • | written by erica.fary 2
0 votes
0 replies
2.1K views
Export phylogenetic tree from "official" trees available on internet
phylogeny python
updated by Biostar 380 • | written by erica.fary 2
0 votes
1 reply
1.9K views
Retrieve taxon age from Ensembl
ensembl gene-age
updated by Ram 4.5K • | written by erica.fary 2
0 votes
0 replies
1.9K views
retrieve phyletic age of genes from ensembl database
ensembl gene database
written by erica.fary 2
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