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0
votes
3
replies
3.1k
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Where can I find tumour-normal pairs public data sets
public-data
tumour-normal
updated 21 months ago by
Ram
43k • written 8.4 years ago by
Andrew
▴ 60
3
votes
2
replies
4.2k
views
Batch effects in sequencing data
batch-effect
updated 14 days ago by
Ram
43k • written 8.7 years ago by
Andrew
▴ 60
8
votes
5
replies
3.6k
views
Is it possible to guess sequencing platform used based on a FASTQ/BAM file?
BAM
FASTQ
updated 16 months ago by
Ram
43k • written 8.9 years ago by
Andrew
▴ 60
6
votes
6
replies
2.6k
views
Generate percent of bases with quality > x from BAM file
bam
updated 18 months ago by
Ram
43k • written 8.8 years ago by
Andrew
▴ 60
0
votes
2
replies
2.6k
views
Comment:
C: Generate percent of bases with quality > x from BAM file
8.8 years ago by
Andrew
▴ 60
1
vote
2
replies
4.0k
views
How are expected error rates calculated?
expected error rate
BAM
8.8 years ago by
Andrew
▴ 60
7
votes
4
replies
5.8k
views
Find reference base for a position in a given read from a BAM file
BAM
updated 17 months ago by
Ram
43k • written 8.8 years ago by
Andrew
▴ 60
1
vote
1
reply
5.8k
views
Answer:
Answer: Find reference base for a position in a given read from a BAM file
updated 17 months ago by
Ram
43k • written 8.8 years ago by
Andrew
▴ 60
12
votes
9
replies
6.5k
views
Substitution error rate and indel error rate from BAM file
Indel
Substitution
Error-rate
BAM
updated 17 months ago by
Ram
43k • written 8.8 years ago by
Andrew
▴ 60
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