This is a test version of Biostars. For the public version, visit https://www.biostars.org.
allyson1115ar
allyson1115ar
Reputation:
30
Joined:
11.2 years ago
Last seen:
9.7 years ago
Latest posts by user
0 votes
1 reply
0 views
Comment: C: How to slice or trim DNA sequence when it encounters NNNN or letters that repres
written by allyson1115ar • allyson1115ar
0 votes
3 replies
2.8K views
How to slice or trim DNA sequence when it encounters NNNN or letters that represent ambiguity in the sequence?
fasta sequence genome
updated by Ram Ram • written by allyson1115ar • allyson1115ar
0 votes
0 replies
3.3K views
Maker Annotation: How to put multiple HMM mod file in maker_opts.ctl?
annotation prediction hmm maker genemark
written by allyson1115ar • allyson1115ar
0 votes
1 reply
1 view
Comment: C: Where can I download HMM profile for different species?
written by allyson1115ar • allyson1115ar
0 votes
1 reply
1 view
Comment: C: Where can I download HMM profile for different species?
written by allyson1115ar • allyson1115ar
0 votes
0 replies
1 view
Comment: C: Where can I download HMM profile for different species?
written by allyson1115ar • allyson1115ar
0 votes
9 replies
4.4K views
Where can I download HMM profile for different species?
hmm profile species genome sequence
written by allyson1115ar • allyson1115ar
0 votes
2 replies
0 views
Comment: C: Where can I download hg18.fa that includes all chromosomes?
written by allyson1115ar • allyson1115ar
0 votes
5 replies
6.2K views
Where can I download hg18.fa that includes all chromosomes?
genome hg18 chromosome fasta
updated by Selenocysteine Selenocysteine • written by allyson1115ar • allyson1115ar
0 votes
1 reply
1.9K views
How to get H3K4me1 FASTA file using UCSC genome browser?
chip-seq sequence ucsc histone
written by allyson1115ar • allyson1115ar
0 votes
0 replies
1 view
Comment: C: Problem in installing Maker
written by allyson1115ar • allyson1115ar
0 votes
0 replies
1 view
Comment: C: Problem in installing Maker
written by allyson1115ar • allyson1115ar
0 votes
1 reply
1 view
Comment: C: Problem in installing Maker
written by allyson1115ar • allyson1115ar
0 votes
1 reply
1 view
Comment: C: Problem in installing Maker
written by allyson1115ar • allyson1115ar
0 votes
8 replies
3.6K views
Problem in installing Maker
maker repeatmasker annotation
written by allyson1115ar • allyson1115ar
0 votes
8 replies
4.0K views
How to get enhancer region from a single chromosome?
enhancer ucsc annotation chromosome rna-seq
updated by natasha.sernova natasha.sernova • written by allyson1115ar • allyson1115ar
0 votes
1 reply
4.8K views
How to use DeepBind?
chip-seq prediction sequence software-error
updated by Ram Ram • written by allyson1115ar • allyson1115ar
1 vote
0 replies
2.6K views
How to generate synthetic transcription factor binding sites (TFBS)?
profile tfbs genome fasta
updated by Ram Ram • written by allyson1115ar • allyson1115ar
0 votes
0 replies
1.9K views
How to read position information in BioProspector, MDscan, and Weeder output?
mdscan bioprospector motif coordinate weeder
updated by Ram Ram • written by allyson1115ar • allyson1115ar
0 votes
1 reply
2.1K views
How to read AlignACE result?
alignace motif-discovery tfbs
updated by Ram Ram • written by allyson1115ar • allyson1115ar
Latest awards to user
TODO: Awards