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Matt Shirley
Matt Shirley
Role:
Moderator
Reputation:
10,460
Joined:
15.3 years ago
Last seen:
1.7 years ago
Location:
Cambridge, MA
Google Scholar:
b7Jyb4YAAAAJ
Latest posts by user
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Answer: A: How to parse a .fasta file in python ?
written by Matt Shirley Matt Shirley
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Comment: C: change specific bases in a fasta file
written by Matt Shirley Matt Shirley
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Comment: C: ncbi fasta files
written by Matt Shirley Matt Shirley
3 votes
1 reply
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Comment: C: Ibd (Identity By Descent) And The Chosen Value Of Pi_Hat
written by Matt Shirley Matt Shirley
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Comment: C: Correct Way To Parse A Fasta File In Python
written by Matt Shirley Matt Shirley
3 votes
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Comment: C: Correct Way To Parse A Fasta File In Python
written by Matt Shirley Matt Shirley
1 vote
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Comment: C: RNA seq - TMM values
written by Matt Shirley Matt Shirley
2 votes
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Answer: A: Get sequences from a BAM file as strings spaced out as described by cigar
written by Matt Shirley Matt Shirley
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Comment: C: Get chromosome sizes from fasta file
written by Matt Shirley Matt Shirley
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Comment: C: is this a potential mosaicism?
written by Matt Shirley Matt Shirley
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Answer: A: is this a potential mosaicism?
written by Matt Shirley Matt Shirley
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Comment: C: How To Extract A Sequence From A Big (6Gb) Multifasta File ?
written by Matt Shirley Matt Shirley
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Comment: C: How Do I Convert Fa Files To Bed Format?
written by Matt Shirley Matt Shirley
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Comment: C: Converting Gvcf Files Into Vcf
written by Matt Shirley Matt Shirley
2 votes
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Answer: A: How to use pysam to execute "samtools fastq xxx.sam>xxx.fastq"
written by Matt Shirley Matt Shirley
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Comment: C: How to use pysam to execute "samtools fastq xxx.sam>xxx.fastq"
written by Matt Shirley Matt Shirley
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Answer: A: Rename FASTA files according to FASTA file header
written by Matt Shirley Matt Shirley
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Comment: C: Making bed files from fasta
written by Matt Shirley Matt Shirley
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Comment: C: A very short gene with very high TPM
written by Matt Shirley Matt Shirley
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Comment: C: A very short gene with very high TPM
written by Matt Shirley Matt Shirley
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