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Comment:
Comment: How to create a subset from a Nanopore fast5 file?
2.9 years ago by
shelkmike
★ 1.2k
4
votes
3
replies
2.3k
views
How to create a subset from a Nanopore fast5 file?
nanopore
fast5
ont
2.9 years ago by
shelkmike
★ 1.2k
0
votes
2
replies
1.3k
views
Answer:
Answer: How to perform GO enrichment for non-model species
3.0 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
777
views
Comment:
Comment: The name of the generated consensus sequence
3.0 years ago by
shelkmike
★ 1.2k
1
vote
1
reply
1.1k
views
Answer:
Answer: How to Align multiple short reads (NGS data) to a short (~200bp) reference?
3.0 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
777
views
Comment:
Comment: The name of the generated consensus sequence
3.0 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
1.2k
views
Answer:
Answer: Mitochondrial sequence data analysis
3.0 years ago by
shelkmike
★ 1.2k
1
vote
1
reply
954
views
Answer:
Answer: Issue with Trimmomatic "Unknown Trimmer"
3.0 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
1.2k
views
Comment:
Comment: bioinformatic sequence interpretation
3.0 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
1.2k
views
Comment:
Comment: bioinformatic sequence interpretation
3.0 years ago by
shelkmike
★ 1.2k
3
votes
1
reply
1.7k
views
Answer:
Answer: How to convert (Newick) tree topology without branch length!
3.0 years ago by
shelkmike
★ 1.2k
1
vote
0
replies
1.3k
views
Comment:
Comment: De novo assembly of chloroplast genome
3.1 years ago by
shelkmike
★ 1.2k
1
vote
1
reply
1.3k
views
Comment:
Comment: De novo assembly of chloroplast genome
3.1 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
3.4k
views
Comment:
Comment: 2021: state and usuge of compressed file standards better than BAM and FASTQ
3.1 years ago by
shelkmike
★ 1.2k
2
votes
1
reply
1.3k
views
Answer:
Answer: De novo assembly of chloroplast genome
3.1 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
1.6k
views
Answer:
Answer: FastQC per sequence GC content
3.1 years ago by
shelkmike
★ 1.2k
1
vote
1
reply
3.4k
views
Answer:
Answer: 2021: state and usuge of compressed file standards better than BAM and FASTQ
3.1 years ago by
shelkmike
★ 1.2k
2
votes
0
replies
517
views
Answer:
Answer: Reconstructing an incomplete transcript of interest
3.1 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
1.3k
views
Comment:
Comment: Next Generation Sequencing: in which sequencing technology the read can Not exce
3.1 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
920
views
Answer:
Answer: suggestion for any contamination identifier& filter tool for genome assembly
3.2 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
730
views
Answer:
Answer: Identification of plastid derived sequences
3.2 years ago by
shelkmike
★ 1.2k
2
votes
1
reply
3.3k
views
Answer:
A: DNA sequence complexity with a sliding window
3.2 years ago by
shelkmike
★ 1.2k
3
votes
1
reply
2.4k
views
Answer:
A: Basecalling of Nanopore Raw file
3.2 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
1.1k
views
Comment:
C: Extracting CDS from fragmented assemblies
3.2 years ago by
shelkmike
★ 1.2k
1
vote
1
reply
1.1k
views
Answer:
A: Extracting CDS from fragmented assemblies
3.2 years ago by
shelkmike
★ 1.2k
2
votes
0
replies
3.9k
views
Answer:
A: What programming language do you use the most in your work? Which one do you lik
3.3 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
2.9k
views
Comment:
C: Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
3.3 years ago by
shelkmike
★ 1.2k
3
votes
1
reply
949
views
Answer:
A: Is there a site that provides genome size sort?
3.3 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
2.9k
views
Comment:
C: Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
3.3 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
2.9k
views
Comment:
C: Calculate Dn/Ds for nucleotide sequences using codeml, hyphy or SNAP.
3.3 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
6.1k
views
Comment:
C: Demultiplexing MinION reads
3.3 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
6.1k
views
Answer:
A: Demultiplexing MinION reads
3.3 years ago by
shelkmike
★ 1.2k
1
vote
0
replies
1.2k
views
Answer:
A: How to trim reads when I'm not sure where they are?
3.3 years ago by
shelkmike
★ 1.2k
1
vote
1
reply
5.1k
views
Comment:
C: How can I remove contaminants from an assembled genome?
3.4 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
1.2k
views
Comment:
C: combine trinity outputs
3.4 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
1.1k
views
Answer:
A: Alignment of short sequences allowing gaps and wildcards
3.4 years ago by
shelkmike
★ 1.2k
3
votes
1
reply
5.1k
views
Answer:
A: How can I remove contaminants from an assembled genome?
3.4 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
694
views
Comment:
C: MiSeq 2*250 read length
3.4 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
905
views
Comment:
C: Error in malloc (SPAdes assembler)
3.4 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
905
views
Answer:
A: Error in malloc (SPAdes assembler)
3.4 years ago by
shelkmike
★ 1.2k
1
vote
0
replies
1.4k
views
Answer:
A: bacterial genome assembly output from canu
3.4 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
2.3k
views
Answer:
A: Fastq file with very high per base sequence quality and no box-whisker plot
3.4 years ago by
shelkmike
★ 1.2k
1
vote
0
replies
1.4k
views
Answer:
A: Trimmomatic trimming 3' bases
3.6 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
1.3k
views
Comment:
C: KEGG ID conversion to pathways
3.6 years ago by
shelkmike
★ 1.2k
0
votes
0
replies
1.0k
views
Answer:
A: How to use gff file of old annotation to annotate new assembly
3.6 years ago by
shelkmike
★ 1.2k
0
votes
1
reply
1.3k
views
Answer:
A: KEGG ID conversion to pathways
3.6 years ago by
shelkmike
★ 1.2k
1
vote
0
replies
1.1k
views
Answer:
A: Anybody knows any stand alone tool/pipeline for Bacterial Gene Ontology (GO) ana
3.6 years ago by
shelkmike
★ 1.2k
1
vote
1
reply
1.6k
views
Answer:
A: What tools/ commands must be used for time and memory usage estimation of an ali
3.7 years ago by
shelkmike
★ 1.2k
3
votes
1
reply
1.5k
views
Answer:
A: How to extend contigs from single-end reads?
3.7 years ago by
shelkmike
★ 1.2k
3
votes
1
reply
5.0k
views
Answer:
A: BlastP vs BlastX
3.8 years ago by
shelkmike
★ 1.2k
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