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John Smith
John Smith
Reputation:
320
Joined:
12.2 years ago
Last seen:
9.7 years ago
Location:
United States
Latest posts by user
0 votes
1 reply
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Comment: C: Can one get the entire genome by putting all contigs together in this particular
written by John Smith John Smith
0 votes
1 reply
0 views
Comment: C: Can one get the entire genome by putting all contigs together in this particular
written by John Smith John Smith
1 vote
5 replies
6.3K views
Can one get the entire genome by putting all contigs together in this particular case?
sequence genome contig
updated by Philipp Bayer Philipp Bayer • written by John Smith John Smith
1 vote
0 replies
0 views
Comment: C: How to determine to which strains of S. pneumoniae these FASTQ files belong to?
written by John Smith John Smith
0 votes
2 replies
0 views
Comment: C: How to determine to which strains of S. pneumoniae these FASTQ files belong to?
written by John Smith John Smith
0 votes
4 replies
2.8K views
How to determine to which strains of S. pneumoniae these FASTQ files belong to?
strains pneumoniae fastq
updated by Ram Ram • written by John Smith John Smith
0 votes
0 replies
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Comment: Comment: Where can I find the raw sequencer output of two strains of S. pneumoniae (FASTQ
updated by Ram Ram • written by John Smith John Smith
2 votes
2 replies
3.1K views
Where can I find the raw sequencer output of two strains of S. pneumoniae (FASTQ format) along with their corresponding reference genomes (FASTA format)?
genome sequencing fastq rna-seq fasta
updated by Ram Ram • written by John Smith John Smith
0 votes
0 replies
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Comment: C: How to make Bowtie 2 align the following reads as pairs?
written by John Smith John Smith
1 vote
3 replies
3.5K views
How to make Bowtie 2 align the following reads as pairs?
bowtie2 paired-end
updated by Ram Ram • written by John Smith John Smith
0 votes
1 reply
0 views
Comment: C: Orientation in paired-end sequencing?
written by John Smith John Smith
6 votes
4 replies
47K views
What read lengths are produced by modern Illumina sequencers?
read-length dna illumina
updated by Ram Ram • written by John Smith John Smith
0 votes
2 replies
0 views
Comment: C: Why is the output of Artificial FASTQ Generator not aligning properly with Bowti
written by John Smith John Smith
0 votes
2 replies
0 views
Comment: Comment: Orientation in paired-end sequencing?
updated by Ram Ram • written by John Smith John Smith
2 votes
6 replies
4.4K views
Why is the output of Artificial FASTQ Generator not aligning properly with Bowtie 2?
bowtie2 rna-seq aritificial-fastq-generator fastq
updated by Ram Ram • written by John Smith John Smith
0 votes
1 reply
0 views
Comment: Comment: Orientation in paired-end sequencing?
updated by Ram Ram • written by John Smith John Smith
0 votes
1 reply
0 views
Comment: C: Orientation in paired-end sequencing?
written by John Smith John Smith
8 votes
14 replies
23K views
Orientation in paired-end sequencing?
rna-seq orientation paired-end bowtie2
updated by Ram Ram • written by John Smith John Smith
16 votes
4 replies
12K views
How do experienced people look for full reference genomes?
reference-genome fasta
updated by Ram Ram • written by John Smith John Smith
0 votes
2 replies
9.1K views
Why is DNA split into many fragments before being sequenced by an Illumina sequencer?
dna rna-seq illumina fastq
updated by Ashutosh Pandey Ashutosh Pandey • written by John Smith John Smith
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