Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : comments
0
votes
3
replies
1.4k
views
Comment: Comment: Modeling RNAseq batch effects using a non-case/control technical replicate
14 months ago by Chris Miller 22k
0
votes
0
replies
703
views
Comment: Comment: calling somatic variants w/o quality filters
16 months ago by Chris Miller 22k
0
votes
0
replies
1.1k
views
Comment: Comment: sciclone iteration does not converge
2.5 years ago by Chris Miller 22k
0
votes
0
replies
4.2k
views
Comment: Comment: sciClone input vaf file?
2.5 years ago by Chris Miller 22k
4
votes
1
reply
25k
views
Comment: A: Extract Base Based On Position From Bam File
updated 3.7 years ago by 43k • written 11.9 years ago by 22k
0
votes
0
replies
1.2k
views
Comment: C: Effects of applying BQSR twice?
3.8 years ago by Chris Miller 22k
0
votes
0
replies
1.8k
views
Comment: C: How to distinguish subclone from sciClone or PyClone result
4.0 years ago by Chris Miller 22k
0
votes
0
replies
2.4k
views
Comment: C: Is there any journal where you can post small programs to solve very specific ta
updated 4.3 years ago by 43k • written 8.2 years ago by 22k
3
votes
1
reply
3.5k
views
Comment: C: brew - yet another fastq utility
updated 4.3 years ago by 43k • written 8.2 years ago by 22k
1
vote
0
replies
5.5k
views
Comment: C: align shortreads using R
updated 4.3 years ago by 43k • written 8.3 years ago by 22k
2
votes
1
reply
4.4k
views
Comment: C: Why do people not call normal and tumor variant separately for somatic mutation
updated 4.3 years ago by 43k • written 8.3 years ago by 22k
0
votes
0
replies
3.3k
views
Comment: C: Generating Read Length?
updated 4.3 years ago by 43k • written 8.3 years ago by 22k
0
votes
2
replies
3.3k
views
Comment: C: Generating Read Length?
updated 4.3 years ago by 43k • written 8.3 years ago by 22k
0
votes
0
replies
2.8k
views
Comment: C: Mixed opinions on somatic variant calling method
updated 4.3 years ago by 43k • written 8.3 years ago by 22k
2
votes
0
replies
3.2k
views
Comment: C: How can a gene exist on three different chromosomes!?!?
updated 4.3 years ago by 43k • written 8.3 years ago by 22k
0
votes
0
replies
59k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.3 years ago by 43k • written 10.0 years ago by 22k
2
votes
0
replies
3.7k
views
Comment: C: Calling variants in blood tumor samples without matched normal samples
updated 4.3 years ago by 43k • written 8.3 years ago by 22k
0
votes
0
replies
4.5k
views
Comment: C: How to make this kind of 3-D plotting for cancer subclones ? (picture attached)
updated 4.3 years ago by 43k • written 10.0 years ago by 22k
0
votes
0
replies
13k
views
Comment: C: CNV analysis tool on exome data for NGS
updated 4.4 years ago by 43k • written 10.1 years ago by 22k
0
votes
1
reply
1.6k
views
Comment: C: SubcloneSeeker SNP import from flat file
updated 4.4 years ago by 43k • written 8.3 years ago by 22k
1
vote
0
replies
3.8k
views
Comment: C: bioinformatics conference ranking
updated 4.4 years ago by 43k • written 8.3 years ago by 22k
1
vote
0
replies
3.2k
views
Comment: C: Help with "sciClone" process and output
updated 4.4 years ago by 43k • written 8.4 years ago by 22k
0
votes
0
replies
6.8k
views
Comment: C: Identifying FLT3-ITD with Pindel
updated 4.4 years ago by 43k • written 8.4 years ago by 22k
0
votes
1
reply
6.8k
views
Comment: C: Identifying FLT3-ITD with Pindel
updated 4.4 years ago by 43k • written 8.4 years ago by 22k
2
votes
0
replies
10k
views
Comment: C: Figure Of Diminishing Sequencing Costs
updated 4.4 years ago by 43k • written 13.5 years ago by 22k
0
votes
0
replies
4.2k
views
Comment: C: Annotating gene fusion predictions
updated 4.4 years ago by 43k • written 8.5 years ago by 22k
0
votes
1
reply
23k
views
Comment: C: How Do I Access And Query Entire Genome Sequences With R
updated 4.5 years ago by 43k • written 8.5 years ago by 22k
0
votes
0
replies
6.8k
views
Comment: C: Identifying FLT3-ITD with Pindel
updated 4.5 years ago by 43k • written 8.6 years ago by 22k
0
votes
1
reply
6.8k
views
Comment: C: Identifying FLT3-ITD with Pindel
updated 4.5 years ago by 43k • written 8.6 years ago by 22k
0
votes
0
replies
3.0k
views
Comment: C: What is a good threshold for calling variants in WES data
updated 4.5 years ago by 43k • written 8.8 years ago by 22k
0
votes
0
replies
3.3k
views
Comment: C: Visualizing Cancer Heterogeneity Results From Ngs Data
updated 4.6 years ago by 43k • written 10.1 years ago by 22k
0
votes
1
reply
32k
views
Comment: C: Calculate The Frequency Of Nucleotides At Each Position In An Mpileup File
updated 4.6 years ago by 43k • written 10.1 years ago by 22k
0
votes
1
reply
3.7k
views
Comment: C: Somaticsniper Hangs Up
updated 4.6 years ago by 43k • written 10.2 years ago by 22k
0
votes
0
replies
63k
views
Comment: C: What Is The Difference Between Hg18 And Hg19?
updated 4.6 years ago by 43k • written 12.2 years ago by 22k
0
votes
0
replies
3.7k
views
Comment: C: Why Does Vcf Aggregate Indels Like This?
updated 4.6 years ago by 43k • written 12.4 years ago by 22k
0
votes
0
replies
12k
views
Comment: C: Best Language For Introductory Programming Course From Within An Introduction Co
updated 4.6 years ago by 43k • written 12.8 years ago by 22k
2
votes
0
replies
12k
views
Comment: C: Best Language For Introductory Programming Course From Within An Introduction Co
updated 4.6 years ago by 43k • written 12.8 years ago by 22k
0
votes
0
replies
3.3k
views
Comment: C: Cnv Detection - Alignment Files With Reported Cnv Needed
updated 4.6 years ago by 43k • written 12.5 years ago by 22k
0
votes
0
replies
7.8k
views
Comment: C: Write Script To Combine All Steps Of Bwa
updated 4.6 years ago by 43k • written 12.9 years ago by 22k
2
votes
1
reply
57k
views
Comment: C: How Can I Know The Length Of Mapped Reads From Bam File?
4.8 years ago by Chris Miller 22k
1
vote
1
reply
5.9k
views
Comment: C: Bin chromosome every 1kb and get average value
5.0 years ago by Chris Miller 22k
0
votes
0
replies
2.5k
views
Comment: C: HGVS format to VCF from portal.gdc.cancer.gov
5.1 years ago by Chris Miller 22k
3
votes
0
replies
7.2k
views
Comment: C: Middle author, but not first author projects. How would you approach this?
5.1 years ago by Chris Miller 22k
2
votes
1
reply
7.2k
views
Comment: C: Middle author, but not first author projects. How would you approach this?
5.1 years ago by Chris Miller 22k
2
votes
2
replies
7.2k
views
Comment: C: Middle author, but not first author projects. How would you approach this?
5.1 years ago by Chris Miller 22k
0
votes
0
replies
3.1k
views
Comment: C: CNVkit: Choice of Bin Size and CNV Calling
5.2 years ago by Chris Miller 22k
0
votes
1
reply
2.8k
views
Comment: C: Visualize VarScan2 Copy Number Aberrations in IGV
5.2 years ago by Chris Miller 22k
0
votes
0
replies
1.5k
views
Comment: C: Detecting known, low frequency SNPs in bacterial populations
5.3 years ago by Chris Miller 22k
3
votes
1
reply
1.0k
views
Comment: C: Finding SNV showing allele specific bias
5.4 years ago by Chris Miller 22k
1
vote
0
replies
2.2k
views
Comment: C: a question about fishplot
5.5 years ago by Chris Miller 22k
530 results • Page 1 of 11
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6