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Comment: Comment: A c library for reading and writing sequences in fasta and fastq format.
8 weeks ago by Rob 6.5k
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475
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Comment: Comment: Mapping vs Alignment mode in Salmon
12 weeks ago by Rob 6.5k
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0
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506
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Comment: Comment: Downstream analysis from STAR Alignment at transcript level
3 months ago by Rob 6.5k
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506
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Comment: Comment: Downstream analysis from STAR Alignment at transcript level
3 months ago by Rob 6.5k
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0
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473
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Comment: Comment: salmon with long reads
3 months ago by Rob 6.5k
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1
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by Rob 6.5k
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1
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1.4k
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Comment: Comment: How to speed Salmon index up
3 months ago by Rob 6.5k
2
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0
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3.5k
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Comment: Comment: A list of technical advantages of Snakemake over Nextflow | Cloud solution for S
7 months ago by Rob 6.5k
0
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1
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914
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Comment: Comment: Problem creating salmon index
9 months ago by Rob 6.5k
1
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1
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1.8k
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Comment: Comment: Mapping vs Alignment
9 months ago by Rob 6.5k
1
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2
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1.8k
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Comment: Comment: How to discard alignments from SAM/BAM file that have mismatches
10 months ago by Rob 6.5k
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0
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2.7k
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Comment: Comment: g++: error：unrecognized command line option ‘-std=c++2a’
12 months ago by Rob 6.5k
2
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0
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2.2k
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Comment: Comment: Obtaining TPM values from STAR alignment and counts with featurecounts using R's
12 months ago by Rob 6.5k
2
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1
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1.4k
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Comment: Comment: salmon output interpretation
14 months ago by Rob 6.5k
2
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0
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2.3k
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Comment: Comment: long read + salmon? (transcript abundance)
14 months ago by Rob 6.5k
4
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0
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1.4k
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Comment: Comment: KMP algorithm's time complexity
15 months ago by Rob 6.5k
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1
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8.1k
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Comment: Comment: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
16 months ago by Rob 6.5k
6
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0
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1.3k
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Comment: Comment: How can I check if an RNA-Seq data is stranded (strand-specific) or not?
16 months ago by Rob 6.5k
1
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1
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2.2k
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Comment: Comment: When is it advantageous to use a non-splice aware aligner like BowTie2 over a sp
17 months ago by Rob 6.5k
0
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1
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1.1k
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Comment: Comment: CellRanger v. 2.0 and v. 7.0
17 months ago by Rob 6.5k
1
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0
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3.0k
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Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
17 months ago by Rob 6.5k
1
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0
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939
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Comment: Comment: High discrepancy between Primary estimate and Bootstraps from Salmon
18 months ago by Rob 6.5k
1
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0
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3.0k
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Comment: Comment: CellRanger runs into error when running fastq files from SRA
21 months ago by Rob 6.5k
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1
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3.0k
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Comment: Comment: CellRanger runs into error when running fastq files from SRA
21 months ago by Rob 6.5k
2
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0
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1.1k
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Comment: Comment: Does RSEM ignore STAR's splice-aware nature?
21 months ago by Rob 6.5k
1
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1
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1.9k
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Comment: Comment: found no concordant and consistent mapping using Salmon
21 months ago by Rob 6.5k
0
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1
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1.9k
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Comment: Comment: found no concordant and consistent mapping using Salmon
21 months ago by Rob 6.5k
1
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1
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3.2k
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Comment: Comment: How to get TPM values from the STAR output?
21 months ago by Rob 6.5k
1
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1
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3.2k
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Comment: Comment: How to get TPM values from the STAR output?
21 months ago by Rob 6.5k
0
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1
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1.7k
views
Comment: Comment: Help needed to troubleshoot a Bioconda recipe for a Rust tool
21 months ago by Rob 6.5k
1
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1
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1.7k
views
Comment: Comment: Help needed to troubleshoot a Bioconda recipe for a Rust tool
21 months ago by Rob 6.5k
1
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1
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1.7k
views
Comment: Comment: Help needed to troubleshoot a Bioconda recipe for a Rust tool
21 months ago by Rob 6.5k
2
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0
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1.7k
views
Comment: Comment: Help needed to troubleshoot a Bioconda recipe for a Rust tool
21 months ago by Rob 6.5k
1
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1
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1.8k
views
Comment: Comment: How does Salmon bootstrapping work?
2.0 years ago by Rob 6.5k
0
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0
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1.1k
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Comment: Comment: Is there a minimum read count or number of genes for Salmon bias correction?
2.2 years ago by Rob 6.5k
2
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0
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2.1k
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Comment: Comment: error when indexing transcroptome using salmon
2.4 years ago by Rob 6.5k
1
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1
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2.1k
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Comment: Comment: error when indexing transcroptome using salmon
2.4 years ago by Rob 6.5k
1
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1
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8.6k
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Comment: Comment: Jellyfish -C option explanation
2.4 years ago by Rob 6.5k
1
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1
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1.8k
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Comment: Comment: Very low read counts for PD1 when using STAR aligner compared to BWA
2.5 years ago by Rob 6.5k
2
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0
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6.7k
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Comment: Comment: Tools to generate spliced/unspliced counts
2.8 years ago by Rob 6.5k
3
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0
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1.2k
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Comment: Comment: Getting libType without running quantification with Salmon
3.0 years ago by Rob 6.5k
0
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1
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1.8k
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Comment: C: Mapping rate troubles
3.2 years ago by Rob 6.5k
0
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1
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2.7k
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Comment: C: Salmon BAM target length different to FASTA file sequence length
3.3 years ago by Rob 6.5k
1
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1
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2.7k
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Comment: C: Salmon BAM target length different to FASTA file sequence length
3.3 years ago by Rob 6.5k
1
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2
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2.7k
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Comment: C: Salmon BAM target length different to FASTA file sequence length
3.3 years ago by Rob 6.5k
2
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1
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6.7k
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Comment: C: How to change cellranger multimapping algorithm
3.3 years ago by Rob 6.5k
1
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1
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6.7k
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Comment: C: How to change cellranger multimapping algorithm
3.3 years ago by Rob 6.5k
2
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0
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1.7k
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Comment: C: RNA-Seq junction reads overhang imbalance
3.4 years ago by Rob 6.5k
2
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0
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6.3k
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Comment: C: update salmon with conda
3.5 years ago by Rob 6.5k
1
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0
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8.9k
views
Comment: C: How does salmon deal with decoy?
3.6 years ago by Rob 6.5k
204 results • Page 1 of 5
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