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1
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0
replies
1.1k
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Comment: Comment: Extracting exons using GenomicFeatures is different from manual extraction
10 months ago by gernophil ▴ 80
0
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0
replies
1.7k
views
Comment: Comment: ERROR using CIBERSORTx Docker version
11 months ago by gernophil ▴ 80
0
votes
0
replies
856
views
Comment: Comment: CIBERSORTx/fractions docker outputs only zeros if --absolute TRUE
11 months ago by gernophil ▴ 80
0
votes
1
reply
856
views
CIBERSORTx/fractions docker outputs only zeros if --absolute TRUE
docker CIBERSORTx
11 months ago by gernophil ▴ 80
0
votes
0
replies
550
views
Comment: Comment: Use DESeq (1) data with DESeq2 Package?
11 months ago by gernophil ▴ 80
1
vote
2
replies
550
views
Use DESeq (1) data with DESeq2 Package?
DESeq DESeq2
11 months ago by gernophil ▴ 80
0
votes
0
replies
57k
views
Answer: Answer: Calculating TPM from featureCounts output
11 months ago by gernophil ▴ 80
0
votes
7
replies
1.4k
views
fasterq-dump outputs "Cannot use '--ngc' as ngc file."
snakemake sra-tools SRA
updated 11 months ago by 43k • written 12 months ago by ▴ 80
0
votes
1
reply
1.4k
views
Comment: Comment: fasterq-dump outputs "Cannot use '--ngc' as ngc file."
12 months ago by gernophil ▴ 80
0
votes
1
reply
1.4k
views
Comment: Comment: fasterq-dump outputs "Cannot use '--ngc' as ngc file."
12 months ago by gernophil ▴ 80
0
votes
1
reply
1.4k
views
Comment: Comment: fasterq-dump outputs "Cannot use '--ngc' as ngc file."
12 months ago by gernophil ▴ 80
0
votes
0
replies
1.9k
views
Comment: Comment: BLAST Database error: No alias or index file found for nucleotide database
14 months ago by gernophil ▴ 80
0
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1
reply
1.9k
views
Comment: Comment: BLAST Database error: No alias or index file found for nucleotide database
14 months ago by gernophil ▴ 80
0
votes
1
reply
1.9k
views
Comment: Comment: BLAST Database error: No alias or index file found for nucleotide database
14 months ago by gernophil ▴ 80
0
votes
1
reply
739
views
Comment: Comment: biomaRt crashes R studio
15 months ago by gernophil ▴ 80
1
vote
3
replies
739
views
biomaRt crashes R studio
biomaRt
updated 15 months ago by 4.6k • written 15 months ago by ▴ 80
10
votes
4
replies
1.3k
views
Difference between ENSEMBL releases
release genome ENSEMBL
updated 16 months ago by 27k • written 16 months ago by ▴ 80
0
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1
reply
1.3k
views
Comment: Comment: Difference between ENSEMBL releases
16 months ago by gernophil ▴ 80
2
votes
5
replies
1.1k
views
Why multiple SYMBOLS, Consequences... for Variant Effect Predictor (VEP)
VEP
updated 7 weeks ago by ★ 2.2k • written 17 months ago by ▴ 80
3
votes
3
replies
755
views
Annotate VCF with Pathways (without performing GSEA)
pathway_analysis VCF
17 months ago by gernophil ▴ 80
0
votes
0
replies
755
views
Answer: Answer: Annotate VCF with Pathways (without performing GSEA)
17 months ago by gernophil ▴ 80
0
votes
0
replies
755
views
Comment: Comment: Annotate VCF with Pathways (without performing GSEA)
17 months ago by gernophil ▴ 80
1
vote
1
reply
500
views
Download SraRunTable via entrez-direct
SRA RunTable command line
updated 18 months ago by 142k • written 18 months ago by ▴ 80
1
vote
3
replies
902
views
bcftools merge doesn't recalculate AF
bcftools
updated 20 months ago by 2.8k • written 20 months ago by ▴ 80
0
votes
0
replies
452
views
Filtering and sorting of multiallelic sites
VCF multiallelic
20 months ago by gernophil ▴ 80
3
votes
1
reply
823
views
Better splitting of mutliallelic sites then bcftools norm --m-any
bcftools
updated 11 months ago by 43k • written 20 months ago by ▴ 80
0
votes
0
replies
1.4k
views
Comment: Comment: Can't convert multiple BAMs from SRA to SAMs
22 months ago by gernophil ▴ 80
0
votes
1
reply
1.4k
views
Comment: Comment: Can't convert multiple BAMs from SRA to SAMs
22 months ago by gernophil ▴ 80
2
votes
6
replies
1.4k
views
Can't convert multiple SAMs from SRA to BAMs
samtools sam-dump SRA
updated 11 months ago by 43k • written 22 months ago by ▴ 80
0
votes
1
reply
1.4k
views
Comment: Comment: Can't convert multiple BAMs from SRA to SAMs
22 months ago by gernophil ▴ 80
0
votes
1
reply
1.2k
views
Comment: Comment: headers missing in efetch results for SRA database
22 months ago by gernophil ▴ 80
0
votes
1
reply
1.2k
views
Comment: Comment: headers missing in efetch results for SRA database
22 months ago by gernophil ▴ 80
2
votes
7
replies
1.2k
views
headers missing in efetch results for SRA database
SRA Entrez.Direct efetch
updated 22 months ago by ▴ 410 • written 22 months ago by ▴ 80
0
votes
1
reply
1.2k
views
Comment: Comment: headers missing in efetch results for SRA database
22 months ago by gernophil ▴ 80
84 results • Page 2 of 2
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