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Pine
Pine
Reputation:
20
Joined:
4.3 years ago
Last seen:
1.7 years ago
Location:
United States

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Latest posts by user
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Comment: Comment: Genotype imputation without a reference panel
written by Pine • Pine
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1 reply
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Answer: Answer: Genotype imputation without a reference panel
written by Pine • Pine
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0 replies
554 views
Significant colocalisation across two GWAS SumStats with opposite "effect sizes"
coloc effect-size gwas colocalisation
written by Pine • Pine
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Comment: Comment: install package: package ‘gmwm’ is not available for this version of R
written by Pine • Pine
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1 reply
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Answer: Answer: install package
written by Pine • Pine
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659 views
Meta analysis of two GWAS summary statistics: one study is case-control and the other is quantitative
gwas meta-analysis
updated by Ram Ram • written by Pine • Pine
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630 views
Choice of relatedness cutoff for GWAS of a large cohort (>100K samples)
relatedness ibd gwas
updated by Ram Ram • written by Pine • Pine
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1 reply
1.3K views
Package for PCA on post-imputation dosage genotype data for GWAS (minimac/Michigan imputation server)
imputation dosage stratification gwas pca
updated by chrchang523 chrchang523 • written by Pine • Pine
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Comment: Comment: Can PCs from PCA of "Chip Genotypes" be used for post-imputation GWAS? [to adju
written by Pine • Pine
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2 replies
1.3K views
Can PCs from PCA of "Chip Genotypes" be used for post-imputation GWAS? [to adjust for population stratification]
chip imputation stratification gwas pca
written by Pine • Pine
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