This is a test version of Biostars. For the public version, visit https://www.biostars.org.
What Is Your Favorite Visualizer For Acgh Or Snp Microarray Data?

I am looking for ways to visualize copy number changes or whole region deletions of multiple samples side by side, with Cytoband and sample attributes Thanks burak

snp microarray visualization

2 answers

Bioconductor beadarraySNP package

reportChromosomeGainLossLOH() function

IGV from the Broad Institute (http://www.broadinstitute.org/igv/) seems one of the options

Log in to answer this question.