WOMBAT for multitrait GWAS analysis
Hi Scientists! Is there anyone who used WOMBAT for multitrait GWAS analysis?
gwas
multitrait
wombat
• 64 views
•
link
written
by
Bushra Bibi
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
TPM normalization of counts
written by Bushra BibiHi, I have RNA-Seq counts fie generated through featureCounts tool. I need to convert count file into TPM normalized form. Can anyone suggest the linux …
-
Finding gtf file for safflower
written by Bushra BibiHi, I have to perform RNAseq analysis of safflower (Carthamus tinctorius) NGS reads. For that I need gtf file but counld not find from NCBI …
-
imputation through beagle
written by Bushra BibiHi scientists, I have 80 samples of wheat GBS data. I have called variants through GATK pipeline. Now I have to perform imputation. Do I …
-
Pangenome of plant
written by Bushra BibiDear all, I have to build/construct a pan genome of a plant organism for which I have 10 assemblies of different varieties. Now I need …
-
Illumina NextSeq 500 Read Length
written by Bushra BibiHi scientists, I have downloaded secondary dataset from [NCBI GEO Dataset][1] sequenced through Illumina NextSeq 500. QC report of the data tells that read length …
-
N50 value of bacterial assembly is not half of total assembly size
written by Bushra BibiDear scientists, I have performed de novo assembly of bacterial WGS data using spades and abyss. However I am not sure which assembly approach is …
-
KEGG Pathway analysis for non-model organism using goseq
written by Bushra BibiDear all, I have to perform KEGG Pathway analysis of wheat DEGs (differentially expressed genes). I found goseq in R but wheat is not native …
-
Good alignment rate for DNA-seq data
written by Bushra BibiHi scientists, I have 80 DNA-seq samples. Alignment rate for 70 samples is good higher than 95% but low alignment rate is observed for remaining …
-
RIP-Seq Pipeline
written by GiV17 •Hi, I am new to RIP-seq analysis. I'm looking for a (more or less) standard protocol to use for bioinformatics analysis, but haven't found much. …
-
NIPTmer testing
written by smrutimayipanda •Hello, I am using NIPTmer tool for NIPT analysis. I found it difficult to understand, specially their perl scripts. Is there anyone who used this …