More posts like this
-
can i use cmapM(matlab) in windows OS?
written by kim 0Hello, iam using cmapM for converting level3 data to level 4 and 5. but in Windows, there is no chmod function so i had an …
-
Consistent cluster coloring
written by solo.albif 0Hi, I am using Seurat to create a UMAP plot with DimPlot, three spatial plots with ImageDimPlot and a heatmap plot with DoHeatmap: ![enter image …
-
Use limma for correlation analysis of RNA-seqdata and continous trait
written by Yibin 0Hi, there I want to use voom function in limma package to analyze the correlations between expression and age(continous data). I am not sure whether …
-
Positive and negative value fold value in ATAC seq using DiffBind
written by Chris 36Hi all, Does positive fold in this case mean the gene in diseased group is more accessible than the control group? The object is created …
-
Seraut JackStrawplot PC1
written by Song 1Hi all, When I draw a jackstrawplot, I run into a same problem that the PC1 has non-significant p-value like this. How can I interpret …
-
testing association between snp and the label disease
written by Eliza 4Hi, I'm trying to perform Cochran–Armitage test with SNPs in r. my data looks like this: ![enter image description here][1] i found the cat function …
-
Genes time-series plots
written by Leite 129Dear Biostars I wonder if someone could give me some tips on how to build a graph similar to this in R: ![enter image description …
-
Cytoscape Tetramer Error Without Hints
written by 630720255 2Hi there, currently I am trying to use Cytoscape Tetramer for some regulator prediction projects, but got an error without any hints. Here is the …
-
Installing Trimmomatic using Command Line
written by Ser 0Hello everyone. I have been trying to install trimmomatic using command line but it's giving me this error. Any help in resolving this issue would …
-
How can I add text label outside the tree in iTOL ?
written by anran04100 0here is the tree in iTOL ![enter image description here][1] now I've got a txt file with information in it ![enter image description here][2] How …
question not clear are you asking for input files or you have input file which is not working ?
sorry but I do not have input file. If you have can you offer to me?