converting transcript positions to genomic locations
Hello everyone, I am doing m6A identification analysis on transcript basis as i am mostly interested in the modifications in transcripts. So, i have obtained the sites with their position on their corresponding transcripts (transcript_id, start, end).
but for global representation of the sites, i want to get the global ie. genomic locations (chr, start, end, strand) for each of the sites. I am having a hard time doing this due to the presence of multiple exons and UTRs in transcripts.
is there any tool which can automate the process.
(PS: I am working with a plant species)
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Pierre Lindenbaum
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baibhu1234 •
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baibhu1234 •
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