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1000 genome dataset download

I would like to compare the results of fastNGSadmix, iAdmix and ADMIXTURE. I want to download the data of 1000 genomes. How do I download the entire vcf of a specific sample, not the vcf broken down by chromosome? Or are there any papers or posts comparing the three tools?

admixture 1000genome iadmix fastngsadmix plink
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updated by chrchang523 chrchang523 • written by Soohyun • Soohyun

1 answer

https://www.cog-genomics.org/plink/2.0/resources#phase3_1kg has plink2-format files, from which you can export a VCF.

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written by chrchang523 chrchang523

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