How to get somatic variation based on RNA-seq data?
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11 days ago
feather-W • 0

Hi,

I want to detect the somatic variation of tumor samples. Now I have bulk RNA-seq data of tumor samples and matched normal samples.

I want to know if there are any bioinformatic tools to detect the somatic variation of tumor samples based on RNA-seq data? Can GATK do this task?

Thanks in advance!

RNA-seq variation somatic • 89 views
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