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converting VCF files to TSV file

How do we convert a large vcf file to tsv file?

vcfmutations variantcellformat

2 answers

a vcf is de-facto a TSV file with a header.

you can also have a look at bcftools query -f

You can try grep -v "^#" file.vcf > file.tsv but of course you discard all metadata

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