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Bed file

I took a intonic alteration for a gene form HMDS and found how many introns will have the alterations. I am generating 2 bed file from a single gene using the name as query. The first file is only exonic coordinates and another is intronic coordinates. I know that bed file is 0 index. While i was checking the number of introns in the bedfile comparing it to the HMDS calculated introns. I am missing some introns in the bed file. My query is why do i see 1 intron less in bed file? The right side is bed file with the coordinatess and the left with the introns , here we see that there are 10 introns in bed file if we count as 0 index but we have an extra 11 intron on the left side of it

bedfile
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updated by Pierre Lindenbaum Pierre Lindenbaum • written by Jeet • Jeet

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and change the title to something more informative please

and IMHO, your problem is difficult to understand

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written by Pierre Lindenbaum Pierre Lindenbaum

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