How to download raw data such as fastq file from MG-RAST?
Hi everyone.
I have been struggling to download raw metagenome sequences, such as fastq files or fastq.gz files, from MG-RAST. I am new to bioinformatics.
Hi everybady, someany know how to make the functional profile in the Picrust? Hi everyone, I performed the identification of the taxonomic profile of a …
Hi I have a metagenome dataset containing mostly Eukaryota. I know that MG-RAST is not capable of accurately predicting eukaryote genes, but I performed prediction …
Hi everyone, I've been trying to run SNAP-aligner (http://snap.cs.berkeley.edu/) to process some SRA samples. But I found some troubles when running it. I decompressed SRA …
First I want to know how many metgenomes in MG RAST database contain a specific organism I'm studying, say Roseobacter of Proteobacteria. Second, I need …
Have you checked https://www.mg-rast.org/mgmain.html?mgpage=downloadintro and the manual that is linked on that page?