This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Need a spatial transcriptomics cancer data

Hello,

I was looking for a example Spatial transcriptome dataset for Lung cancer (NSCLC) like something for the brain. I searched and nothing found, and I would appreciate your help.

ngs scrna-seq single-cell

2 answers

I searched and nothing found

There are no doubt others but ones labeled "primary lung cancer" in this project: https://www.ncbi.nlm.nih.gov/Traces/study/?acc=PRJNA831555&o=acc_s%3Aa

One example for illustration: https://trace.ncbi.nlm.nih.gov/Traces/index.html?view=run_browser&acc=SRR21530587&display=metadata

The Human Tumor Atlas has a wealth of cancer spatial data

https://humantumoratlas.org/explore

Log in to answer this question.