Extract variants from 100 000 genomes project
I am trying to extract variants from a list of genes in the 100 000 genomes project.
There are two options to do this :
https://re-docs.genomicsengland.co.uk/small_variant/
https://re-docs.genomicsengland.co.uk/aggv2_functional_annotation_queries/
The scripts are given on the websites but they throw errors, I cannot run them. Maybe someone could sit down with me via zoom and help. Happy to pay for your time.
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"but they throw errors, I cannot run them."