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Converting a bam dataset to vcf

I have a wgs dataset in a bam file. What is the best/possible ways of extracting a vcf file from it?

bam vcf
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updated by Ram Ram • written by guntul • guntul

1 answer

The process is called variant calling and there is plenty of great resources, pipelines and tutorials out there if you google for it. Please invest that effort.

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written by ATpoint ATpoint

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