Retrieve deseq2 normalised counts with only results file available

Question

[BM]

I have several Deseq2 results file, so a csv file with ensembl name, baseMean , log2FoldChange, lfcSE, stat, pvalue, padj columns. Unfortunately, I don't have the original count files.

Is there a way to extract Deseq2 Normalised Counts from the results file only? Is this possible?

Thanks in advance

Answer 1

[ATpoint]

No, this information is lost.

Note that without counts and raw data at hand your analysis is not reproducible, so treat results with care. I would personally not even use the results productively other than for internal hypothesis generation since you can never rerun analysis.

Answer 2

[Ayeh]

unfortunately, No, its not possible. if you have fastq files or every intermediate files before construction of count matrix, you can do all thing at first to great your count matrix again.