How do I figure out what splicing variant is expressed in certain tissue?
I'm planning an experiment where I'll be over-expressing a certain gene in stem cell derived neurons (iPSC -> iN). For the over-expression, I would like to know what splicing variant of this gene (if any) is specific to my neurons. I'm having trouble finding a resource to figure this out. Does anyone know where I can find broad information about splicing variants in different tissues, or will I have to look at specific sequencing experiments in literature? Thanks!
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that sounds like a GTEX Portal thing
That's awesome, thank you!