Structure 2.3.4 project setup
Hi guys
I am new to this molecular work.
I have 98 lines of wheat I set my parameters as follows:
Number of individuals: 98
Ploidy: 6
Number of loci as 16381 because according to excel i have 16383 columns
Missing data as -1
No matter what i do i keep getting the same message "
bad format in data source"
Data entries are more than expected (16383)
1 row with 16393 entries (marker name)
588 rows with 16393 entries (data)
How can i fix this??
• 828 views
•
link
updated
by
Pierre Lindenbaum
•
written
by
Theresa •
•
written
by
Theresa •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Why does STRUCTURE v2.3.4 (command line) does not work?
written by giulia.trauzzi •
-
Running STRUCTURE from command line
written by giulia.trauzzi •
-
using PGDSpider to generate structure file
written by jiazhou0116 •
-
STRUCTURE software format
written by kaoritsunenari0318 •
-
ERROR running STRUCTURE in command line
written by chparada •
-
Structure produces no result
written by rimgubaev
-
LD, LD-decay and Correlation Coefficients of SNP loci
written by mysisayk •
-
R: How to convert graphNEL object into Adjacency Matrix
written by urwa •
-
Why my markers don't appear in the fst graph in Lositan?
written by r.defraga •
-
SNPs in LD-independent loci
written by jpsangio •
I don't know what is structure but you're taling about excel so check you're having the correct lines ending with your file. ( see https://fr.wikipedia.org/wiki/Carriage_Return_Line_Feed ).
Check this with
file /path/to/your/file. If the message contains CR/LF you will have to fix the file format.