Does anyone happen to know the genome build of the POPRES data? I was looking online, but wasn't able to find anything. I only have the BED, BIM, and FAM files with me in PLINK format.
POPRES is based on the Affymetrix 500k SNP array. There is a dedicated web page where you can find several information, including all the names of the SNPs included in the analysis and probably the genome build used at that time.
I am trying to merge seven bed/bim/fam files in plink using the following code: Plink —bfile chr2 —merge-list all_files.txt —make-bed —out merged The (all_files.txt): chr3.bed …
POPRES is based on the Affymetrix 500k SNP array. There is a dedicated web page where you can find several information, including all the names of the SNPs included in the analysis and probably the genome build used at that time.