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deconvolution of spatial transcriptome

Hello everyone

I have analysed spatial transcriptome data for mouse samples belongs to small interstine. We do not have access to single cell data for same patients. Is there any method available for the deconvolution of spatial transcriptome data using machine learning approach ?

I would appreciate all the suggestions.

Thanks in advance

deconvolution spatial transcriptome
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updated by mmorillo • mmorillo • written by Omics data mining Omics data mining

Hi,

did you publish your results?

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written by mmorillo • mmorillo

1 answer

https://pachterlab.github.io/LP_2021/current-analysis.html#deconvolution

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written by jv jv

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