As the title says, with the exit of the Pfam site everything is migrating here https://www.ebi.ac.uk/interpro/search/sequence/ Unfortunately it seems we can't build a query of …

Hi mates, I was reading a paper which it states they identify protein sequences in *Halyomorpha halys* genome performing a local BLASTp search using the …

Hello! Is it possible to obtain InterPro coordinates of a protein domain in human alternative protein-coding transcripts from Ensembl? For example, for [TFAP2A gene][1], Ensembl …

I am trying to work on an assignment where I need to search NCBI gene to find the gene that has the most exons. It …

I would like to get a list of all domains of all proteins in my list. Browsing STRING, I noticed from the the domain structures …

I have a fasta sequence file with multiple protein entries. I want to find out which PFam domains do each of the sequence belong to …

Hi, I used FancyGene in the past to graphically display genes and features that are close together in a sequence, and compare that genomic region …

HUPO, the Human Plasma Proteome, has an online database (http://www.peptideatlas.org/hupo/hppp/), however, there is no current automation for looking up several peptides (batch mode) only one …

How long would it take to blast an Entire Proteome to another one? I mean in a normal PC such as the latest mac mini …

Hey there, I'm looking for a fasta download for the complet proteome Pycnoporus coccineus. Does someone know where I can find it? I can't find …