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Best software to analyze Novogene bulk RNA-seq

Hi all, I am have some bulk RNA-seq data generated by Novogene. I am looking for the most user-friendly analysis software (preferably available on GitHub, Bioconductor, or one of the other open-source software repositories). Can someone please make recommendations?

rna-seq bulk

1 answer

Novogene is just the company, it is regular RNA-seq, commonly referenced workflows are:

https://www.bioconductor.org/packages/devel/workflows/vignettes/RNAseq123/inst/doc/limmaWorkflow.html

https://bioconductor.org/packages/release/workflows/html/rnaseqGene.html

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