Star indexing
I've been trying to STAR index a reference sequence file but I am not getting a fa fai file.
These are the files I am getting:
This is the command that I ran:
• 1,219 views
•
link
updated
by
ATpoint
•
written
by
borna.jurkovic13 •
•
written
by
borna.jurkovic13 •
1 answer
Log in to answer this question.
More posts like this
-
Chip Seq Analysis of RNA Polymerase 2
written by Gaurav •
-
Understanding IGV
written by zizigolu
-
Using featureCounts on HISTA2 aligned data for the tomato genome
written by duplessisantzel •
-
How to do preprocessing from fastqc
written by Lulu •
-
why 99% reads failed to align in mir-seq analysis?
written by mohammadhassanj
-
DESEQ2 analysis - PCA plot
written by shome •
-
How to calculate the Z value of infernal cmscan?
written by shelvenlone •
-
Can not plot degree distribution in Cytoscape Network Analyzer on logscale
written by bhodai •
-
How can I add text label outside the tree in iTOL ?
written by anran04100 •
-
vcftools --TajimaD does not start at 0 and misses variants
written by grey •
Please do not paste screenshots of plain text content, it is counterproductive. You can copy paste the content directly here (using the code formatting option shown below), or use a GitHub Gist if the content volume exceeds allowed length here.
I would also apply the suggestion in the warning if I was you and generally remove all whitespaces and non-standard characters from file names such as this
(1).