CellBender vs CellRanger
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Entering edit mode
18 months ago

How would you plot the number of CellRanger nuclei from output? Which file is used and what would the code look like?

Total reads?

I only see info for number of genes detected, UMIs, and mitochondrial reads.

Thanks.

**this is an snRNA-seq study using CellRanger 10X.

snrna-seq • 310 views
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