This is a test version of Biostars. For the public version, visit https://www.biostars.org.
heatplot not displaying all significant pathways

Hi,

I am wondering how the heatplot function in clusterProfiler decides how many pathways to display? I've performed enrichGO with the results below and plot heatplot using:

heatplot(module_GO, showCategory = 10,label_format = 10)

enter image description here

however, only 1 pathway was displayed although there are many pathways that is significant (padj<0.2) How can I make it plot all the sig pathways?

Thank you.

heatplot clusterprofiler

0 answers

No answers yet.

Log in to answer this question.