Copy Number analysis in 10X Visium data
Hello,
Has anyone used any inferCV for copy number analysis in 10X Visium data? 10X suggests copyKat but it does not appear accurate. The same for STARCH. Thank you
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oghzzang •
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kgiannikou •
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kgiannikou •
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Hi, have you read this paper?
https://www.nature.com/articles/s41586-022-05023-2
I think they made an extended tool of inferCNV.
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oghzzang •
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